| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1659 |
|---|
| Symbol | |
|---|
| ID | 4908642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1549045 |
|---|
| End bp | 1550244 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640125406 |
|---|
| Product | 2-aminoadipate aminotransferase |
|---|
| Protein accession | YP_001056542 |
|---|
| Protein GI | 126460264 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0665896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG GCAAGCTTCT GGCGGAGCGT ACCAAGTATA TGACCGCCAG CGAGATTAGG
GAGTTGCTCA AGTGGGCGAC CGTGGACGTG ATTTCGTTTG GAGGGGGCAT GCCGGACCCC
TCCACGTTCC CCGTGGAGGA TATCCAAAAG ATCGTCAACT ATGTCCTCGA GGCGTATCCA
CACAAGGCCC TCCAGTATGG GTCAACTGAG GGAGTCTACG AGCTACGCCA AGAAATTGCA
AAATTTAGCG AGGAGCACCA CGGAATTAAG ACCAAGGCTG AGAACGTCCT TGTGACAGTG
GGGTCGCAGG AGGCGCTGGA GTTGCTCGGC CGCGTTTTTA TAAACCCCGG CGACGTGGTT
ATTACAGAGA ACCCGACCTA CCTGGCCGCG TTGCAGGCGT GGCGCGTGTA CCAGCCCAAG
CTAGTGGGCA TACCGATGGA CGAGCACGGC ATGATTGTAG AGCTGTTAGA GGACAAGGTG
AGGGAGCTGT TGGCCAGGGG CGAGAGGATA AAATTCATCT ACACGATCCC CACGGCGCAG
AACCCCACTG GCATTACAAT GACGCAGGAC AGGCGCAAGT ACCTCCTAGA GGTGGCGGAG
CGGTACGACT TACTCATCGT GGAAGACGAC CCCTACTCCT ACTTCCTCTT TGAGCCTATA
CAAGTGGCCC CAATAAAGGC GTTGGACAAG TCGGATAGAG TGATCTACCT CTCCACGGCG
TCTAAGATTT TTGCGCCGGG CTTCCGCCTC GGCTGGGTTG TGGCGAGTGA GGAGGTGATT
AAGTGGTTCT ACTTGGCCAA GCAGTCGCTT AACTTAAACA CCTCGAACTT TGTGCAATAC
ATATTCTTGG AGGGGCTTAG GCGCGGCGTG GTGACTAAAA ATCTGCCGCG GGTTAAAGAG
CTATACAAGA GGAAGCGCGA CGCCATGTTG GCTGCCTTGG AGACCTACAT GCCTGAAGGC
GTGAGGTGGA CCCGGCCCTC GGGCGGCATG TTCGTATGGG CCACCGTCCC GCCGCAGATA
GACACGCGGG AGCTGTTGCG CAAGGCCGTC ACCCAGTACA AGGTGGCCTT TATCCCTGGC
CACGGCTTCT TCGTCGACGA GTCTGTCAAA AACGCCATGA GGCTAAACTT CACCTACCCC
TCTTTTGAGC AAATAAACGA GGGCATCCGC CGCCTCGCTC TGGCAATTAA AGAGGCATGA
|
|---|
| Protein sequence | MDIGKLLAER TKYMTASEIR ELLKWATVDV ISFGGGMPDP STFPVEDIQK IVNYVLEAYP
HKALQYGSTE GVYELRQEIA KFSEEHHGIK TKAENVLVTV GSQEALELLG RVFINPGDVV
ITENPTYLAA LQAWRVYQPK LVGIPMDEHG MIVELLEDKV RELLARGERI KFIYTIPTAQ
NPTGITMTQD RRKYLLEVAE RYDLLIVEDD PYSYFLFEPI QVAPIKALDK SDRVIYLSTA
SKIFAPGFRL GWVVASEEVI KWFYLAKQSL NLNTSNFVQY IFLEGLRRGV VTKNLPRVKE
LYKRKRDAML AALETYMPEG VRWTRPSGGM FVWATVPPQI DTRELLRKAV TQYKVAFIPG
HGFFVDESVK NAMRLNFTYP SFEQINEGIR RLALAIKEA
|
|---|
| |