Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1658 |
Symbol | |
ID | 4909658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1547868 |
End bp | 1548749 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640125405 |
Product | succinyl-CoA synthetase (ADP-forming) alpha subunit |
Protein accession | YP_001056541 |
Protein GI | 126460263 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0963642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGTCC TCGTAAGCCC TAACACGAGA GTCGTAGTAC AAGGCGCCAC CGGCCGCGAA GGCTCTTTCC ACCTACAGCG CATGTTGGAG TATGGTACAA AGGTAGTCGC CGGCGTGACT CCGGGCAAAG GCGGCACCAC GGTCCACGGC GTGCCTGTGT ACGACACCGT GGAGGAGGCG GTTAGACGCC ACGGCGCCAA CGCCTCTGTC GTATTTGTCC CAGCTAAGTT TGCCCCAGAC GCCGTGCTGG AGGCCGTGGA CGCAGGCATA GAGCTGGTGG TTGTAATAAC GGAGCACATA CCAATCCACG ACACTCTCAG AGCCGTGAAC TACGCCAGGG TCAGGGGCGT CACAGTCATT GGGCCAAACT GCCCCGGAAT AGTGGCTCCC CCGGTGAGGA CAAAGCTCGG CATAATGCCC AATAACATAT ACCAGACCCC TGGAAAAATC GCCGTAGTTA GCAGGTCGGG GACTCTCACA TACGAAATAT CGTACCAGCT CGTGAAGGCC GGCTTTGGCA TAAACATTGC CATAGGCGTG GGCGGCGACC CGATAGTGGG ACTCGACTTA ATGGAGGCTA CGGTAAAGGT GGCCGAGGAC CCCGATGTGG ATGGAATCGT GGTAATTGGC GAAGTGGGCG GCGACGCCGA GGAGAGGCTG GCGAAGCTCT ACGCAGAGGG TGCTATTAAG AAGCCCATTG TAGCCTACGT GGCCGGCCGC ACTGCCCCGC CGGGGAAGCG CATGGGCCAC GCGGGGGCCA TAGTAATGCT GGGATCCGGC GATGCGAGGG GCAAGATAGA GGCGTTTAAA GCCGCCGGGA TCCCCGTCGC AGAGACCCCA TTTGAGGTGC CTCAGCTCTT GGCTAAGCTG TTAAAGCGTT GA
|
Protein sequence | MTVLVSPNTR VVVQGATGRE GSFHLQRMLE YGTKVVAGVT PGKGGTTVHG VPVYDTVEEA VRRHGANASV VFVPAKFAPD AVLEAVDAGI ELVVVITEHI PIHDTLRAVN YARVRGVTVI GPNCPGIVAP PVRTKLGIMP NNIYQTPGKI AVVSRSGTLT YEISYQLVKA GFGINIAIGV GGDPIVGLDL MEATVKVAED PDVDGIVVIG EVGGDAEERL AKLYAEGAIK KPIVAYVAGR TAPPGKRMGH AGAIVMLGSG DARGKIEAFK AAGIPVAETP FEVPQLLAKL LKR
|
| |