Gene Pcal_1657 details

Gene Information

• Locus tag: Pcal_1657
• Symbol: sucC
• ID: 4908779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1546723
• End bp: 1547871
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640125404
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_001056540
• Protein GI: 126460262
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.231909
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGTTGC ACGAATATGA GGCAAAGGAG CTTTTCGCAA AGTACGGGGT AAAGATCCCG 
CCGGGCAGGC TGGCGCTCAC GCCTGAGGAA GTGCGCAAAG CGGCGGAGGA GATGGGGCCG 
CCGGTTGTGC TAAAGGCGCA GGTGGTGGTG GCTGGGCGCG GCAAGGCCGG CGGCATAAAA 
GTGGCCAAAC GCGTGGAAGA GGCGTATGAG CTGTCGAAGC AGATGTTTGG GATGAATATA 
AAGGGCCTAA CGGTGAGGAA GCTGTATGTG ACTAAGTACT TGGAGGTGGA GAGGGAGATG 
TACCTCTCCC TCATCATAGA TAGGGCCACT CGGCGGTTTC TCTTCCTCGC CTCGCCCGTG 
GGAGGCATGG ACATCGAGGA AATCGCCAAG ACTACCCCGG AGAAGATTAA GAGAGTGTAC 
GTGGACCCCT TCGTGGGGCT TAGAGACTAC CACGTCCGCT CTATAGTCTC GTGGCTCGGC 
TTTAGCCCAG GTACGGCTCA GTGGCAACAA GCGGCCTCCA TTGTTCAAGC CATGTACAAG 
ATAGCGGTGG ACTACGACGC AGAGCTAGTG GAGTCCAACC CTCTCGCCCT CACCAAGGAG 
GGCGACGTCG TGCCTCTCGA CGCGAGGGTG ATCGTAGATG ACAACGCCTT GTTTAGACAC 
CCAGAGCTGG AGAAGGCCCT CGAGGAGGAC CCCCGCGACA TCACGGAGTT TGAGGCCTAC 
GCTAAGAAGA TAGGCTTCCA CTACGTGGAG CTCGACGGCG ACATTGGCAT AATAGGCAAC 
GGCGCCGGCC TCACTATGGC GACCATGGAC TTAGTCTACC ACTTCGGGGG CAGGCCGGCG 
AATTTCCTCG ACATCGGCGG CGGCGCCAGC AGAGAGGTTG TGAGGGAGGC TGTGAAAGTC 
CTCCTCAACC ACCCCAGGGC CAAGGTGATC TTCATAAACA TCTTTGGCGG CATTACTAGG 
GCTGACGAAG TCGCCTACGG CGTTAAAGAG GCCCTCCAAG CCGCTGGGGG TACCACAAAG 
AAGATCGTGG TAAGAATGAA GGGGACAAAC GAGGAGCTTG GAAGAGCCAT TTTAGCCGAA 
ATAGGAGTAC CACTCTTTGA AAGCGCCGAA GAGGCAGCTA AAAAGGCGGT AGAACTGGCC 
AAACTATGA 

 

Protein sequence

MKLHEYEAKE LFAKYGVKIP PGRLALTPEE VRKAAEEMGP PVVLKAQVVV AGRGKAGGIK 
VAKRVEEAYE LSKQMFGMNI KGLTVRKLYV TKYLEVEREM YLSLIIDRAT RRFLFLASPV 
GGMDIEEIAK TTPEKIKRVY VDPFVGLRDY HVRSIVSWLG FSPGTAQWQQ AASIVQAMYK 
IAVDYDAELV ESNPLALTKE GDVVPLDARV IVDDNALFRH PELEKALEED PRDITEFEAY 
AKKIGFHYVE LDGDIGIIGN GAGLTMATMD LVYHFGGRPA NFLDIGGGAS REVVREAVKV 
LLNHPRAKVI FINIFGGITR ADEVAYGVKE ALQAAGGTTK KIVVRMKGTN EELGRAILAE 
IGVPLFESAE EAAKKAVELA KL