Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1650 |
Symbol | |
ID | 4908651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1539612 |
End bp | 1541867 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640125397 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001056533 |
Protein GI | 126460255 |
COG category | [R] General function prediction only |
COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTACG GAGCCGGTGA CGTGTCATTT TTGAGAAAGG TATTAGAGGA CCCAGGGAGG GAGGTGGTGT ATGTGAAGAC TGACGAGGCT GAGAGAGTGG AGCCCTGTTG TGACGTGGGG GAGGTGCTTA GGGCTGAGGT GGCGCAGGCG TTTAAGTCGC TGGGGATTTC CTCTCTCTAC CGTCATCAGT ATGACGCAGT TGTGAGCATA AGGGCGGGGA GAGACACGGT AATTGTCGCG GGCACCGGCA TGGGGAAGAC CGAGGCCTTC CTGGCCCCCA TACTAGAGGC CTCTCTTGAA TCTCTCGGGG GGCCCGTCGC GCTTGTCCTC TACCCCACCA AGGCCCTTGC TCGAGATCAG TTGTCTAGGC TTAGGAGATT CGCCGACCGG CTGGGGGTGA GAGTCATGGT TTACGACGGG GACACCCCCC AGAGGGAGAG GAGGATATTG TACGACTCAC CTCCCCACAT CATTGTGTCA AACCCAGACA TGGTTAGCCA AGCCCTCATG CATGTGGCTA AGTTCAGAGA GCTTGTGAAA AGGGTTAGAT ACCTAGTCCT CGACGACTTC CACGTGTACG GGGGAGTCTT TGGCTCACAT ATGTACTACC TACTTCGGCG CCTGCGGCGG TTTTCCAGGC CTGTGTATAT CGCCACCTCT GCCACCGTGG GCAACCCAGC CGAGTTTACA CAAGCACTGT TTGAGAGCGA TAGAGTGAAC GTAGTCGTCG GCCCCCTGGG GCGGCGGGGG AGGCTGGTGC AGGTCTTGGC TAGGCCTAGG TTTAGGTCTA AGTGGGCTGA GGCTGCTAGG CTGGCCGCGA TATGTGTGGA GGAGGGGGTG AAGTGTCTCG TGTTTACGGA CAGCCACAGA TACAGCGAGG TTATCTACAG GGCGTTGAAG ATGGGGGGCT ACGGCGAAAG AGTGGCGGTG CACAGGGCTG GGCTAGACGC AGAGGAGAGG AGGCGTGTGG AAGACGCCTT TAAGAGGGGG GAAATCGACG TGGTGATATC TACGCCCACC TTAGAGCTGG GCGTAGACAT AGGCGACGTG GATGTGGCAG TTCTAGCCTC CATACCGCCT TCCTACAACC GCTACCTACA GCGCGTCGGG CGAGTGGGGC GGCGCGGGCA GACGGGCTAC GTTGTACAGA TACTTGGCAA CGACCCCATC TCCCAGTACT ACCGCAACTA CCCCCACGAG TTTTTTGCAA GAGCGCCGGA GCCGCTTGGC TTTGAGAAAG AGAACGAGGA CGTCGCAGCC CTCCACCTCT TGGCGGCGGC CTCCGACATG CCCCTACGGC TCAGCGAGTT GAGCAATTTT GAGAAAGAGC TGGCGGAGTC CCTCCTGGCG AAGGGCTACT TGGCCAAGGT GGGCAACTAC TTGCGCATAA CCCCAGCGGG GAGGGAGGCG TTGAGCTCCC TCAGCCTGAG GGGGTCGCCC CACGTCGTAA AGATAAAGAC TGTGGATGGA AGGACGCTGG GGGAGAGGGA GTTGCCCCTC GCCCTCTACG AGCTTCACCC AGAGGCCATA TACATGCACG GCGGGAGGAC CTACGTGTCC AAGTCCCTCG ACTTGACGAA GAGAGTCGCA ATCGTGGAGC CTGTGGACGC CGAGGACTTG GTCACTCAAG CCCTCGAGGA CATGGATCCC GAGCTCGTGG AGGTTGTAGA GGAGGGCTCT GTGGAGGGCG TCCGCTATCA GTACGGGCGT CTTAAAATTA GGATCACGGT GCACGGCTAC GCCTTAAAGC GGTTTACAAC TGAGGAGACG CTGGGCGAGT ACCCCATAGA GCCTCTCTCC TACGAGTTTG AGACCAAGGG CGTCGTGTTG TACATGCCCC TGGTGCGCTT CACGTCTGAG GAGGCCTTGG ACTGGGAGGC GCGGGCCAAG GGGTACCACG CCACTGAGCA CGTCCTAATA TCTGCGGCCG AGATCGCAAT AGGCTCGGCG AAGACCGATC TAGGCGGCAT AAGCTACCCG GACGGCGTCA TAGTCATATA CGACTCCCAC GTGGGAGGCA ACGGCACCTC TAGACTCCTC TTAAAGAACT TTAGGCGCGT CGCCGAGGTG GCGTACAAGA TAGTGAAGGG CTGCGACTGC GTCGACGGAT GCCCAAAGTG CGTCTTCTCC CCCTACTGCG GCAACAACAA CAAGATGCTG TCGAGGCGGA ACGCCGCGAG GATTTTAGAG CATGTGCTCA AAGGCGGCGG CGCTTCGCCC GTTCTTGAAA TACCGAAGGT CCGCGGCATA GTGTAA
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Protein sequence | MHYGAGDVSF LRKVLEDPGR EVVYVKTDEA ERVEPCCDVG EVLRAEVAQA FKSLGISSLY RHQYDAVVSI RAGRDTVIVA GTGMGKTEAF LAPILEASLE SLGGPVALVL YPTKALARDQ LSRLRRFADR LGVRVMVYDG DTPQRERRIL YDSPPHIIVS NPDMVSQALM HVAKFRELVK RVRYLVLDDF HVYGGVFGSH MYYLLRRLRR FSRPVYIATS ATVGNPAEFT QALFESDRVN VVVGPLGRRG RLVQVLARPR FRSKWAEAAR LAAICVEEGV KCLVFTDSHR YSEVIYRALK MGGYGERVAV HRAGLDAEER RRVEDAFKRG EIDVVISTPT LELGVDIGDV DVAVLASIPP SYNRYLQRVG RVGRRGQTGY VVQILGNDPI SQYYRNYPHE FFARAPEPLG FEKENEDVAA LHLLAAASDM PLRLSELSNF EKELAESLLA KGYLAKVGNY LRITPAGREA LSSLSLRGSP HVVKIKTVDG RTLGERELPL ALYELHPEAI YMHGGRTYVS KSLDLTKRVA IVEPVDAEDL VTQALEDMDP ELVEVVEEGS VEGVRYQYGR LKIRITVHGY ALKRFTTEET LGEYPIEPLS YEFETKGVVL YMPLVRFTSE EALDWEARAK GYHATEHVLI SAAEIAIGSA KTDLGGISYP DGVIVIYDSH VGGNGTSRLL LKNFRRVAEV AYKIVKGCDC VDGCPKCVFS PYCGNNNKML SRRNAARILE HVLKGGGASP VLEIPKVRGI V
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