| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1638 |
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| Symbol | |
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| ID | 4908726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1525569 |
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| End bp | 1526315 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640125385 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001056521 |
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| Protein GI | 126460243 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCAGC TCGGCAGAGT CCTCTCCCTC CTCGGCGTCG GGGAGCGGGA GGCGGAGATC
TACGTAGCCT TGGTAGAACA GGGCCCCAAA TCGGCAAGAG AGTTGGCAGA GGCGCTGGGC
ATCCCCTACA CAAAGATATA CACCTACCTC TACAAGTTGG AGAACCTGGG CGTTGTGGCA
AAGGAGGGCG GTGGGAGGCC GTACAGGTAC AGGGCGAGAC CCCCCGCGGA GGTCTACAAA
ATGCTTGTAA ACAAGACATC GGAGGCGTTG AGGCAGTTAA AGCCCTATTT CGACGGGTTG
CAAATGGTCT ACGAGAGACA GCACGCAGTT GCCTCGACGT TCTTGACGCT GGTGAGAGGC
ACGGAGCGGA TTGCCGAGTT AGTCCACGAG ATCATAACTA CGGCGGACTC CGAGGTGTAC
CTCGCTCTCC CCTTCCCAGA GCTGGTGACG TATAGGCTGG TCTCGGCAAT AGAGGAGGAG
TCAAAGAGGG TGTCTATCAA GGTTCTTACC ACTGCACGTC TGAGGCCCAT GTTGAGCCTG
CCTCCCCGCG TGGAGGTGAG GACCACGGCT GAGCTCTTCG GCGGAGGCGC CATCGGAGAC
GCCGTCGTGA TCTACGTAAA ACACTTCGAC GAACTGAGCG GAGTTTACTC CAACGAGCGC
TACATAATCG AGGTTGCCAA GACTTACTTC AACCACGTCT GGCAGAGGGC AAGTTTTAAT
ACTGGAACAG AGCAACACAC AAGCTGA
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| Protein sequence | MDQLGRVLSL LGVGEREAEI YVALVEQGPK SARELAEALG IPYTKIYTYL YKLENLGVVA
KEGGGRPYRY RARPPAEVYK MLVNKTSEAL RQLKPYFDGL QMVYERQHAV ASTFLTLVRG
TERIAELVHE IITTADSEVY LALPFPELVT YRLVSAIEEE SKRVSIKVLT TARLRPMLSL
PPRVEVRTTA ELFGGGAIGD AVVIYVKHFD ELSGVYSNER YIIEVAKTYF NHVWQRASFN
TGTEQHTS
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