| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1637 |
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| Symbol | |
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| ID | 4908528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1523135 |
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| End bp | 1525522 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640125384 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001056520 |
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| Protein GI | 126460242 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGGA TATCGAGAGT TGAGCTGGAG AACTTCCGCT CGTATAGGGG AGCGCACAGG
CTGGAGCTAG GCGACGTCAA TTTGCTGTGG GGCAGGATAG GCGCTGGGAA AACCTCCGTT
TTCTACGCCA TTGAGTACGC CTTGTTTGGC CAACAGCTTG AGGTCAAGGA GAGGGTGGCC
AAGCTAGCCG ACTTGATACA CTCGGGGTCT CACGAGGCTA GAGTGGCTCT AGAGCTGGTG
GACGGGGCCA ATGTGCTTAA GGTGGAGAGG AAGCTGGGAA AGCGGGGAGC GGAGAAGCTC
GTCGTTGTGC ACAACGGCGT AGAGCTCAGA GGCGGCGAGG CGGAGAGGAG GCTGGAGGAG
CTTTTAGGCG TAGACGAGGA TTTGTACGAG CGGTTGGTAT ACATTTCTCA CAGGACGCTG
GAGGGCTTTA TCTACGGCAC CTCTCAGAAG AGGGCAATCT CGGTGGATAG GCTCTTCGGC
ATCGACGTGA TAGACGGCGT AGTTAAGACC GTCTCCTCGG CCGAGAAGGC GCTGTTGGGG
AAGGCGGAGG AGCTGAGGAA GAGGCTGGCG GCTTATGAGA AGTACCGGGA TGTGATTAAG
AGGTATGGTG GCTACTCGGG GCTAGTGTCT AGGCTTAGGG CTCTGAGCTC CGAGATTGAG
GCGCTGAAGG AGCGGGAGGC TATGTTGACG AGGACGGTGG AGGAACTTGC CAGGGCGCGG
GCGGCGTATT TGGCGAAGCT GAAGGAGCAC GAGCAGATTC TACTGGAGTA CTACAGGGCC
AGGTCTGAGC TCGAGTTTTT GGAGTCCTCC GCGGGGGGCG AGGTAGACGT GGGCGCGCTG
GAGAAGGTGA AGGCCGCGCT TAGGGAGGCC GCTGAGGAGT TTGAACACAT GCTTGACCCA
GGCATATTGG AGAAGTTGTA CAAGGCGTCC GACCTGGAGG CCCTCTCGGT GGCCATGGCC
GAGGTGTACG ACGCATTGAC TAGGGTTGCA AAAGACTTGG AACTCGAGCT GACCGACGTG
AAAAAGGCCT ATGAGGAGTA TGTGGCCAGG GCGAGGAGAC TTGAGGAGGA GGTGGCCGCG
GCTGAGGCGC GGCTGAGGAG ATTGGAGAAG CCGTTTTTGC GCTTTCAAGA GCTTTTAAAG
AAGCTTCGCT CTTTGGAGGA GGCCCGGGCG AGGCTAAGCG AGGCCAGGCG TAGGCTTAGC
GAGGCGGAGA GAGAGGCGGC GTATTACACG TCTCTCAAGA CTGTGGCGTT GTACCTAGCT
GAGACAAACG CCTCTGTTTG CCCAATATGC GGCTCGCCTA TAAGCAGAGA GGCCGTAGAG
AAAGTAGTTC GGGATATCGA TGAAAAGTTC GGCGGCGTAG TGAAGAGAGT GGAAGAGCTA
CGGGAGGAGG TTAAGGCGCT GGAGAGAGAG GTAGAGGAGA TGGAGATCCT CCAGGGCGAC
GCGGCAGAGT ACATAGCCGC GAAGGCTAGA CTGGACGAAT TAAAGGTAGA GAGAGAGGAG
GTGGTGAAAA AGGTGTTGCA GGCTGAGAAG TCGGTTAGGC AGTTGGAGAA GAGAATTGAG
AAGTTGCGCG AGTTTTTTGC AAAAGTGGAC AAGCGTGTCA TCTCAGACGC CGTCTCTAGG
TATGGGAGAG CCGTGAGGAT TAGGGAGCTT AGGAAAAGGG TCAAAGAACT TGAGGAGAGG
CTGAGGCAGG CGGGGATAGG GGGAGAGGAG CTCGAGGTGG AGGTCAAGTG GAGGGAGGCG
GCGGCTGAGC TTGAAAAGGC GGCGGCTAGG CTAGCCGAGT TGTACAAGGA GAAGAGCCTC
TTGGAGGAGG CGGCGCGGGA GGTTGGGGAG GAGGCGGAGG GGCTGAAGAA GAGGCTGGAC
AACGTGCTGT ATGCGTATGG AAGACTAGAG GAGCTCAAGT CCCGGCTTGA GTTAGCCAAG
GTTAGCGCAA GAGCTAGGCT TGTGGAAGTG GTGAGGAGCC GTTTCAACGA GGTGTTTCAA
AGCTTGTATA AGTATGGCGA CGTTGTGAAA GTGGACGCGG CGGTGGAGCC CAGCAGGGGG
TACTACGACT TCTACGCCAT TTCTCCCTCC GGCGATAGAT ATGGCGTCTC CCGGCTGAGC
GATGGGCAGA GGCTGTCAAT AGCCCTCTCC CTGGCCCTAG CGTTAAGAGA AATCTCCCAG
GTGAAGCTCG GCTTCTTAAT CTTCGACGAG CCGATACCCT ACGTCGATGT AAATGTGAGA
AAGGCCTTCG CCCAACTTCT CACATCGCTG GCTGGGCGCT ACCAGCTCCT AGTGGCCACC
CAGTCTAGGG AGTTCGCGGA GGAGGTCAGA GAGGCTTTGC CAAACGCAAA GCTGTTCACC
GTTGTGAAAG ACGGCGCCTC TGCGCTGATA GAGGGGTTAC AAAGCTGA
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| Protein sequence | MWRISRVELE NFRSYRGAHR LELGDVNLLW GRIGAGKTSV FYAIEYALFG QQLEVKERVA
KLADLIHSGS HEARVALELV DGANVLKVER KLGKRGAEKL VVVHNGVELR GGEAERRLEE
LLGVDEDLYE RLVYISHRTL EGFIYGTSQK RAISVDRLFG IDVIDGVVKT VSSAEKALLG
KAEELRKRLA AYEKYRDVIK RYGGYSGLVS RLRALSSEIE ALKEREAMLT RTVEELARAR
AAYLAKLKEH EQILLEYYRA RSELEFLESS AGGEVDVGAL EKVKAALREA AEEFEHMLDP
GILEKLYKAS DLEALSVAMA EVYDALTRVA KDLELELTDV KKAYEEYVAR ARRLEEEVAA
AEARLRRLEK PFLRFQELLK KLRSLEEARA RLSEARRRLS EAEREAAYYT SLKTVALYLA
ETNASVCPIC GSPISREAVE KVVRDIDEKF GGVVKRVEEL REEVKALERE VEEMEILQGD
AAEYIAAKAR LDELKVEREE VVKKVLQAEK SVRQLEKRIE KLREFFAKVD KRVISDAVSR
YGRAVRIREL RKRVKELEER LRQAGIGGEE LEVEVKWREA AAELEKAAAR LAELYKEKSL
LEEAAREVGE EAEGLKKRLD NVLYAYGRLE ELKSRLELAK VSARARLVEV VRSRFNEVFQ
SLYKYGDVVK VDAAVEPSRG YYDFYAISPS GDRYGVSRLS DGQRLSIALS LALALREISQ
VKLGFLIFDE PIPYVDVNVR KAFAQLLTSL AGRYQLLVAT QSREFAEEVR EALPNAKLFT
VVKDGASALI EGLQS
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