Gene Pcal_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1625 
Symbol 
ID4908139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1514247 
End bp1514753 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID640125372 
Productcytidyltransferase-like protein 
Protein accessionYP_001056508 
Protein GI126460230 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1056] Nicotinamide mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01527] nicotinamide-nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCCC TCTTCGTAGG ACGTTTCCAG CCGTTGCACT GGGGGCATGT AAAAGTGGTG 
GAGTGGCTCC TCACGCACTA CGACGAGGTA GTAATAGCGC TGGGGTCGGC AGACAAGGCC
CTCACATTTG AAAACCCCTT TACCCCCGGC GAGAGGCTTG AGATGTTCAG GCGGCACTTT
GGCCCAAACT GCCGCCTCCT CTTTTGCACA GTGCCCGACA CAGGCGGCTC CTCAAGCCTA
TGGGGTGCAT ATGTCCGCCA CTGGTGTCCC CCCTACCAAG TGGCCTACTC CAACAACCCC
TACGTCGCTG CCGCGCTTGA GTACTGGGGG GTAGAGGTGA GGGCTCACCC ACACCACGAG
GGCTACTCAG CCACGGAGGT AAGGCGCCTA ATGGCGCAGG GAGATCCCCG GTGGAAGGAG
CTTGTCCCAA GCGCAGTGGC CGAGTACATC GAGGAGATAG GCGGCGTCGC TAGAGTTCAA
CATTTATATA GGGCGGCAAA CAGGTAG
 
Protein sequence
MRALFVGRFQ PLHWGHVKVV EWLLTHYDEV VIALGSADKA LTFENPFTPG ERLEMFRRHF 
GPNCRLLFCT VPDTGGSSSL WGAYVRHWCP PYQVAYSNNP YVAAALEYWG VEVRAHPHHE
GYSATEVRRL MAQGDPRWKE LVPSAVAEYI EEIGGVARVQ HLYRAANR