| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1618 |
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| Symbol | |
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| ID | 4908136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1510395 |
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| End bp | 1511318 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125365 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001056501 |
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| Protein GI | 126460223 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCTC TGTGGCTAAT ACTCCCGGGT CTTTTTCTCT TCCTCCTCTT CAATTTGTGG
CCTATAGTCT ACTCAGTGTA CATCTCTTTT ACAGATGCCA ACATTAGAAA TTTCCCCACT
CCGCCTCCTT GGGCCCCCGA GGAGTTAAAA CAGGCGAGGC CGCCCCCTGA CTACGTCGGC
CTTAAAAATT ACGTCTCTAT CTTCGCCGGG CCAGCCGCCT CAGGCTTTTT TAACGCCTTT
CTCTGGACTC TCATTTTCGT CGCAGTGTCT GTCCCCGCCA AGGTGGCCGT GGGCACGTTG
GTGGGATTGC TCATGTCTTC TGAAAAGGTG TTGGGCAAGT CGATTATGAG GGCGTTTTTG
GTAGTGCCGT GGGCCCTCCC GCTTATACTC TCGGTGGTTG CGTGGCGCTA CGTCTTTGAC
CCCGCGTTTG GGCCTGTCAA CCAGTTGTTG CGCTACTTCG GCGTAGGAAA TCCGCCCGAC
TGGATAGTGA ATAAGGACTA CGCCTACGCC GCAATGGTGG TGATAGAGAC TTGGCTTGCG
TATCCCTTCA TAATGACCGT GGTCATCGGC GCCTTGGCCA ACGTGCCTAG GGCTGCGTAC
GAGGCGGCTT ATATAGATGG GGCGGGGAGG TGGGACATAT TCACGAAGAT CACTCTTCCG
CTGATTAAGA GGCCGCTAAT CTACGCCTCG GTGATGACCG CCGCGGCGTC GCTACAGTTC
TTCCTCGTGG CCTTTCTCTG GAACTTTATC CAGCTATACG ACCGCTTCAT CCTCGCCTAT
GGGTACTACT GGGCCTTTGG GTCGCCTTTC CGCGAGTACG GGCTGGCGGC CGCCGTGCTC
ACAGTCTCCG CGCTTTTCAT ATCCGTGTTT ATGCTTGCGG CGATTAGGCT GACTGGCTTG
TTAAAGGGGG CCTATGAGAG CTAG
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| Protein sequence | MRPLWLILPG LFLFLLFNLW PIVYSVYISF TDANIRNFPT PPPWAPEELK QARPPPDYVG
LKNYVSIFAG PAASGFFNAF LWTLIFVAVS VPAKVAVGTL VGLLMSSEKV LGKSIMRAFL
VVPWALPLIL SVVAWRYVFD PAFGPVNQLL RYFGVGNPPD WIVNKDYAYA AMVVIETWLA
YPFIMTVVIG ALANVPRAAY EAAYIDGAGR WDIFTKITLP LIKRPLIYAS VMTAAASLQF
FLVAFLWNFI QLYDRFILAY GYYWAFGSPF REYGLAAAVL TVSALFISVF MLAAIRLTGL
LKGAYES
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