| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1617 |
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| Symbol | |
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| ID | 4908142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1509013 |
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| End bp | 1510395 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125364 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001056500 |
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| Protein GI | 126460222 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT ACCTACTCCT TGGAATCGTC CTAGCAGTGA TTTTAATAGG TCTGGCGGCC
TACTTTATCA CACAATCACC CGCCGCGCCC TCCCCAACGC AGTCCCCCGC CACTACTGCC
CCAACGCAAG CTACTCCAAC TACCACGCCG CCTGCCACTA CACCCTCTCC CACCCCTCCA
ACCACCGCGC CCTCCCCAAC GCCGGCCCCA ACCACCACGG CCACTCCTAC GCAGACTCAC
CCCGCCACGC CCACTCCGAC AACTACCACC CCGCCGCAGG CCGCCCAAGT GACCATAAGG
ATATGGCACG CGCTTAACCC AGAGGAGGAG GCCGTGTTTA AAGAGGTGGC CGCCCTCTAT
ATGCAACAAC ACCCCAATGT GAAAATAGTG TTTGAAAACA AGGCGCCTGA TCTTCAAACC
GCGGTTCTCG CTGCTATTGC GCCTCCTTAC AGCGAGAAAT TCGACCTCTT TATCTGGGCA
CATGACTGGA TTGGGCTCAT GGTGGAGGCC GGCGCCTTAA AGCCTGTAGA AAACGATGTG
CAAGACGTGT TAAACAAGTT CGTGGTAAGT ATACCTCAGT ACAAGGGCCA TATCTACGGC
CTGCCCTTCA CAGCAGAGAC TGTGGCGCTT ATATGCAATA AGAAGATGGC GCCTCAGCCC
CCCACCACTT TTGCCGACCT CTTAAACGTC ATGAAGAGCT TTAATAAGCC GCCTCAGACC
TACGGCATCT CATATGTTGT AAATCCCTAC TTCATATCTG CGTGGATACA CGGGACCGGC
GGATACTACT TCGACGACAA GACCGAGAAG CAGGGTCTCA CAGACCCCAG GACGATAGCG
GGCTTCCAGT TCTTTAAGAC ATACATTATG CCGTACGTCG CGCCGAACCC CACGGACTAC
AACACCCAAG TGAGTCTATT CCTCTCAGGG CAGACCCCGT GCATGGTGAA CGGGCCTTGG
TCCATAGGCG CAGTTAAGAA AGCCGGGATA GACTTCTACG TAGTGCCCCT GCCCCCAGTC
AACAGCACCT ACGTCCCAAG GCCCTACGGA GGCTTGAAGA TGTTCTATGT CACCATATAC
GCCTCAAAGG AGGCCATAGA CTTCATGAAG TGGTTTACCA CAGATCCCCA AGTGGCAAAG
ATCCTAGTGG ATAAGCTAGG CTATGTGCCA GTGATTAAAG ATGTGAACAT TGCAGATCCA
GTGGTGCAGG GCTTCTACGA CGCAGTTAAA AACGCGTATC TAATGCCCGT GTCGCCTAAG
ATGCAACCCG TGTGGGGCGC CGTGGATTTG GTAATACAGA ACTCCATCGT GTCCAACCAA
AAGACGATAG CGCAGGCTGT GCAAGATGCG GTTAAGGACC TCTGCGCAAG AGGCGTCTGT
TGA
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| Protein sequence | MNKYLLLGIV LAVILIGLAA YFITQSPAAP SPTQSPATTA PTQATPTTTP PATTPSPTPP
TTAPSPTPAP TTTATPTQTH PATPTPTTTT PPQAAQVTIR IWHALNPEEE AVFKEVAALY
MQQHPNVKIV FENKAPDLQT AVLAAIAPPY SEKFDLFIWA HDWIGLMVEA GALKPVENDV
QDVLNKFVVS IPQYKGHIYG LPFTAETVAL ICNKKMAPQP PTTFADLLNV MKSFNKPPQT
YGISYVVNPY FISAWIHGTG GYYFDDKTEK QGLTDPRTIA GFQFFKTYIM PYVAPNPTDY
NTQVSLFLSG QTPCMVNGPW SIGAVKKAGI DFYVVPLPPV NSTYVPRPYG GLKMFYVTIY
ASKEAIDFMK WFTTDPQVAK ILVDKLGYVP VIKDVNIADP VVQGFYDAVK NAYLMPVSPK
MQPVWGAVDL VIQNSIVSNQ KTIAQAVQDA VKDLCARGVC
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