| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1606 |
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| Symbol | |
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| ID | 4909211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1494167 |
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| End bp | 1495432 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125353 |
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| Product | glutamate dehydrogenase (NADP) |
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| Protein accession | YP_001056489 |
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| Protein GI | 126460211 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAA ACGGGCAATT CCTTGAGTAT ACTTTGCAAG TAATTAGGAG AGGTGTGGAA
ATGGGCGGAT TCCCAGAGGA CTTTTACAAA CTGTTATCAA GGCCAAAGCG GATAATACAA
GTCTCAATAC CTGTGAAAAT GGACAACGGC AGCTACGAAG TGTTTGAGGG CTACCGTGTT
CAACACAACG ACGCTCTTGG TCCTTTTAAG GGTGGTATTC GTTTTCACCC GGAGGTGACT
TTGGCTGATG ATATTGCTCT TGCCATGCTT ATGACGCTTA AGAATAGCCT CGCGGGCCTG
CCCTACGGCG GGGCTAAGGG GGCTGTGAGA GTGGACCCGC GGAGGCTCTC TAGGCGGGAG
CTTGAGGAGT TGGCTAGGGG CTACGCGCGG GCTGTGGCGC CTCTCATAGG CGAACAGTTG
GACATCCCAG CCCCAGACGT GGGCACAGAC TCCCAGGTAA TGGCCTGGAT GGTAGACGAG
TACTCTAAGC TGGCGGGGAG AAACGCCCCA GCAGTCTTTA CCTCAAAGCC CCCCGAGCTC
TGGGGAAACC CAGTCAGAGA ATACTCCACA GGCTTCGGCG TGGCAGTAGC GGCAAGAGAA
GTCGCGAAGA GGCTATGGGG AGGAATAGAG GGAAAAACCG TCGCCGTCCA CGGCGCCGGG
AATACGGGGG CTTGGGCGGC CTATTGGCTT GAGAAAATGG GCGCCAAAGT CGTGGCCATT
TCAGACACGA GGGGCACCGT GGTGAACAAG GCGGGCATAC CGGGCGAGCA GATCCTCAAG
GTCTACATGG AGAAGAAGAG GGACAAAAGC GCCACAGTGC TGGCGTTGGA GGGGGAGAAG
ATAGCTGACT CCAACGCCTC GCTCTACCAA GACGTGGACA TCTTGGTGCC TGCCGCTATT
GAGAATGTGG TTAGGGAGGA TAATGTGGGG TTGGTTAGGG CTAGGTTGGT GGTGGAGGGG
GCTAATGGGC CCACTACCCC TGGGGCTGAG AGGAGGCTGT ATGAGAGGGG GGTTGTGGTG
GTGCCGGATA TCTTGGCTAA CGCGGGCGGC GTGATTATGT CTTATCTGGA GTGGGTGGAG
AATTTGCAGT GGCTGTTTTG GGACGAGGAG GAGACTAGGA GGAGGCTTGA GGCCATAATG
TCCAACAACG TGGCTAGAGT ATACGCCAGG TGGGAGAAGG AGAAGAGCTG GACCATGAGA
GACGCAGCAG TAGTCACAGC CCTAGAAAGA ATATACAACG CCATGAAGAC AAGGGGGTGG
ATCTAG
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| Protein sequence | MSQNGQFLEY TLQVIRRGVE MGGFPEDFYK LLSRPKRIIQ VSIPVKMDNG SYEVFEGYRV
QHNDALGPFK GGIRFHPEVT LADDIALAML MTLKNSLAGL PYGGAKGAVR VDPRRLSRRE
LEELARGYAR AVAPLIGEQL DIPAPDVGTD SQVMAWMVDE YSKLAGRNAP AVFTSKPPEL
WGNPVREYST GFGVAVAARE VAKRLWGGIE GKTVAVHGAG NTGAWAAYWL EKMGAKVVAI
SDTRGTVVNK AGIPGEQILK VYMEKKRDKS ATVLALEGEK IADSNASLYQ DVDILVPAAI
ENVVREDNVG LVRARLVVEG ANGPTTPGAE RRLYERGVVV VPDILANAGG VIMSYLEWVE
NLQWLFWDEE ETRRRLEAIM SNNVARVYAR WEKEKSWTMR DAAVVTALER IYNAMKTRGW
I
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