Gene Pcal_1603 details

Gene Information

• Locus tag: Pcal_1603
• Symbol: leuD
• ID: 4910013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1491425
• End bp: 1491910
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640125350
• Product: 3-isopropylmalate dehydratase small subunit
• Protein accession: YP_001056486
• Protein GI: 126460208
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTCATAA GAGGGAGGGC AATAGTCTAC GGAGACAAGA TAGACACAGA CGTCATAATA 
CCGGCCAAGT ACCTCGTGTA CACAGACCCC GCCATCTTGG GCCAACACGC CATGGAGCCC 
ATAGACCCCG AGTTCCCCAA AAAGGCCAAG GGCGCCATAC TTGTGGCGGG CAGAGCCTTT 
GGCATGGGCT CTTCGCGCGA GCAGGCAGCC ATAGCGCTGA AAGGCGCCGG CGTCTTGGCA 
GTGGTTGCGG AGTCCTTCGC CCGCATATTC TACCGCAACG CGATAAACGT GGGCCTCCCC 
GTCCTCCAAG CGCCAGGCGT GAGGGCTAAA GTGAGAGAAG GCGACGAGCT CGAGGTAGAC 
CTCACGGGGG GCGTCGTGAG GAATTTAACC ACGGGCGAGG CAATACAGGG AAAGCCCCTA 
GCCGGCCTCC CCCTAGAAAT CCTAAAGGCG GGCGGCCTAT TGCAGTACCT CAAAAATAGG 
GCCTAG 

 

Protein sequence

MLIRGRAIVY GDKIDTDVII PAKYLVYTDP AILGQHAMEP IDPEFPKKAK GAILVAGRAF 
GMGSSREQAA IALKGAGVLA VVAESFARIF YRNAINVGLP VLQAPGVRAK VREGDELEVD 
LTGGVVRNLT TGEAIQGKPL AGLPLEILKA GGLLQYLKNR A