Gene Pcal_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1597 
Symbol 
ID4908947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1484642 
End bp1485052 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content52% 
IMG OID640125345 
Producthypothetical protein 
Protein accessionYP_001056481 
Protein GI126460203 
COG category[S] Function unknown 
COG ID[COG4904] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGA GAGCTAGCCT ATATCTCTCC CTGGTGTTAA ATCTGCTCGG GAAAATGCGC 
AACTTGTTTA CCTTGGACAA CTGCGACATC AAAAAGCTTA AGGCTTCTAA ACTGCGGAAG
GACTACGACG CAGTGACACG GAGCTTACTG CCGCGGGCGT TGGCGGAGTT TTACAACAAC
TACGGCTTTG AGGCTCGGGA GGAGCCCGAC CACTTGGTGA CTATGCTCGC CTTCATGGCC
CAACTCGCGC GCGACGAAAG TCAGGAGTCT CTTAAGGCCC AGTTGAGGTT TTTAAACTCG
CATTTAATAC CCACGGTAAA ATACGGCGTA GAAGCGTGCC CAAGTCTGAA GGCGCTTCTT
GAAATCTTAG AGGCCGACGC AGAGGAGGTC AAAAAGAGGC TCCATGTCTG A
 
Protein sequence
MNERASLYLS LVLNLLGKMR NLFTLDNCDI KKLKASKLRK DYDAVTRSLL PRALAEFYNN 
YGFEAREEPD HLVTMLAFMA QLARDESQES LKAQLRFLNS HLIPTVKYGV EACPSLKALL
EILEADAEEV KKRLHV