Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1584 |
Symbol | rpl4lp |
ID | 4909004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1473325 |
End bp | 1474182 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640125332 |
Product | 50S ribosomal protein L4P |
Protein accession | YP_001056468 |
Protein GI | 126460190 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCCG TGGTTAAAGA GTTGTTGAAG TTCAAGCTTC TGGACCTCTC GCCGTACATA AAACCAGCGG AGGAGAGGCC TCCCGAGGCT CTTAAGGTTT ATGACGTAAA TGGGCAGTAC ATGGCCGACA TAGAGACGCC GATACACTTC TACGAGCCCG TGAGGCCCGA CTTGATTAGG AGAGCCTACT TAAGCGCCTT GAGCGCGAGG TTTCAGCCTA AGGGCGTCTA CGAGGGCGCT GGCAAAGAAC ACAGTTGCGA GTCCTTTGGC GTGGGCTTGG GAATTGCGAG AATTCCGAGG TACAAGGGGC ATCTCTGGCC GCGTGGCTGC TTTGCCCCTA ACACTAGGGG AGGCAGGAGG GCCCACCCGC CGAGGCCTGA GAAGAAGTTG CACGAGGAGA TTAACTGGAA GGAGAAGAAC TTGGCCATTA GGTCCGCCAT AGCGGCCACT GCGTACAAGT CGTGGGTAGC CGCCAGGGGG CACATGGTGG AGAAGGTCCC CTCTCTGCCG CTTGTGGTGT CGGGGGATGC TGAGAAAATT GCTAAGGCCA AGGAGGCGAA GAAGCTCTTC GAGGTGCTGG GCCTCTGGCC CGACGTGGAG AGGGCGGCGG AGGGCGTGAA AATTAGGGCT GGGAAGGGGA AGATGCGCGG CAGGAGGTAC AAGGAGCCTA AGAGCGTGTT AGTCGTGGTG TCGGAGCTGG ACGTGCCTCT AATAGGCGCC GTTAGGAATT TCCCAGGCGT AGACGTTGTG CCAGTGAGCC ACTTAAACAT GCTGGTGCTG GCTCCCGGCG GCGTGCCGGG GCGGCTGACC CTCTGGACCG CCACGGCTGT GGAAAGGCTG AAGGGACTGT TCCTATGA
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Protein sequence | MGAVVKELLK FKLLDLSPYI KPAEERPPEA LKVYDVNGQY MADIETPIHF YEPVRPDLIR RAYLSALSAR FQPKGVYEGA GKEHSCESFG VGLGIARIPR YKGHLWPRGC FAPNTRGGRR AHPPRPEKKL HEEINWKEKN LAIRSAIAAT AYKSWVAARG HMVEKVPSLP LVVSGDAEKI AKAKEAKKLF EVLGLWPDVE RAAEGVKIRA GKGKMRGRRY KEPKSVLVVV SELDVPLIGA VRNFPGVDVV PVSHLNMLVL APGGVPGRLT LWTATAVERL KGLFL
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