Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1583 |
Symbol | rpl3p |
ID | 4909593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1472297 |
End bp | 1473313 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640125331 |
Product | 50S ribosomal protein L3P |
Protein accession | YP_001056467 |
Protein GI | 126460189 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTTA AGATCAATAG GCCGCGTAGA GGCTCGATGG GAGTCTATCC GAGGAAGCGC GCGGCGGATA TTGTGCCTAG GGTGCGCACG TGGCCTGAGG TCAACCTGGG GAAGCCGACG CTCTTGGGCT TTGCCGCGTA TAAGGCGGGG ATGCTCCACG CCGTTGTTGT AGACGACAGG CCCACTAGCC CGCTTTATGG GAAAGAGGTG GTGAAGGCTG TCACAGTCCT CGACGCGCCT CCTCTTTACG TGGCCGCGGT GAGGCTTTAC ACCCTGGACC CAACCAACGG CTACAAGGTG GCGGTGGGGG AGGCTTGGGT CTCTGAGCCA CCGGCCGACT TGAGGAGAGT TCTCACTTTG CCGGAGAAGT TTGACACTGA GAAGCAGTTG AAGGCGTTGG AGGAGTACAG AGACGTGGCT GTCGACGTGA GAGTCCTCGT GGCTACTCAG CCCAGGCTCT CCGGCATTGG GAAAAAGACG CCCGAGGTCT TGGAAATCCC CGTGGGCGGA GTGCCCAGCA TAGACGAGAG GATTAACTTC GCCATATCGC TCCTGGGGAA GACCGTGTCG CCGAAGGACG TCTTTACGCC TGGCCAGCTG GTCGACGTGA TTGCGGTCAC TAAGGGCAAG GGCTACCAGG GCGTAGTGAA GAGGTTCGGC GTCACTATCC TCCCGAGGTG GCACAAGCAC AGGAAGGGCC ACAGGCGGAC GGGCACCATA GGCCCCCAGG CGCCGGCGCT TATGTTCACT CAGCCCAGGC CGGGCCAGAT GGGCTTCCAC CAGCGCACTG AGTACAACAA GAGGATTCTA AAGATAGGGG ACAACGGCGC CGAGATTACA CCCAAGTCTG GCTTTCCGCA CTACGGCGTT ATAAAGGGGC CGTACATCCT TCTGCAGGGC AGCGTGCCTG GGGCTAGGAA GAGGCTTGTC GTGCTTAGAT ACCCAGTTAG ACCGCCTAAG AAGGCGCCGC CAGCCGCAGA GCCGCAGGTG GTTTGGGTTA GTTCTCAAAG TATTTAA
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Protein sequence | MGLKINRPRR GSMGVYPRKR AADIVPRVRT WPEVNLGKPT LLGFAAYKAG MLHAVVVDDR PTSPLYGKEV VKAVTVLDAP PLYVAAVRLY TLDPTNGYKV AVGEAWVSEP PADLRRVLTL PEKFDTEKQL KALEEYRDVA VDVRVLVATQ PRLSGIGKKT PEVLEIPVGG VPSIDERINF AISLLGKTVS PKDVFTPGQL VDVIAVTKGK GYQGVVKRFG VTILPRWHKH RKGHRRTGTI GPQAPALMFT QPRPGQMGFH QRTEYNKRIL KIGDNGAEIT PKSGFPHYGV IKGPYILLQG SVPGARKRLV VLRYPVRPPK KAPPAAEPQV VWVSSQSI
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