| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1564 |
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| Symbol | |
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| ID | 4908323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1455110 |
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| End bp | 1457347 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125312 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001056448 |
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| Protein GI | 126460170 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTACA GGATAACAGT TATTGGCGTT GTCCAAGGGG TTGGCTTTAG ACCTTTCATC
TTTCACCTAG CCGAGAAATA TGGAGTAACC GGCTATGTGA GAAACATGGG AGGCGGCGAG
GTGGAGATTT GGGCCGAGGG AGGCGACGTG GAGCACTTCG TGGAAGAGCT TCTCCACAAG
CGTCCCGCGG TTATAGAGTT GGAGGAGGTG AAGGTGGAGA AGGTGGAGCC GGCTGGCTAC
AAGTCGTTTG AAATTTTGAA GAGCGGCGAG GCGCAAGTCG TTAGGTCTGA GATTCCGCCT
GACTTCGCCA TTTGCGACGC ATGTCTTAAG GAGTTTAAGG GGGGCTCCAG GAGGGCTGGC
TACTACTTCA TCTCTTGTAG CTGGTGTGGC CCGCGGTTCT CAGTCATGCG ATCTCTGCCT
TACGACAGAG AAAGGACGTC TTGGGGCAAC TTCGCCATGT GTCCCGTCTG CAGAGAGGAG
TACAATAGTT TGGACAAGGG CGGTTTAAGG AGGTTTTACT ACCAGGGGAT CTCCTGTCAA
CATTGTGGGC CCAGGTTTAC GCTACTAGAC GGCGGGGGGA GAGTCGTCGA GAGAGACCCC
TCTATCGCTG AGGTGGCCAA GCTCGTGAAA GAGGGCTACA TTGTAGCTGT TAAATCCACT
GGGGGCTTCC ACTTGGCTGC CCTCGCAGAC AACGACGACG TTGTGTTAAA GCTTAGGGAG
AGGAAAATGA GGAAGCGTCA GCCCTTCGCC GTAATGTCCC TGGAGGAGGT TTTGCCAAAG
CTTGTCCACT TAAGCGACGA GGCCCTGGCG ATTTTAAAGT CGCCTCAGAG GCCCATCTTG
CTTTTGCCCA AGAGGGAGGG TAGCCCAGTC TCAAAGTGGG TCTCTCCCGG CCTATCCGTG
GAGGGAGTCT TCCTCCCATA CACGGCGTAT CACTACGAGC TTCTCCAGGG AGCGGGCTTC
CTAATTATGA CAAGCGCAAA CCGCCACGGG CGCCCCACTT GCACAAGCGA GGAGTGTGTG
ATAGAGCAGA AGCTCGCCGA CTACATCCTC ATACACAACT TAGAGATTGT CCACAGAACG
GACGACTCTG TGCTGAGGTT TACAGATGGG GAGTTGGTGT TTATACGGAG GTCTAGGGGC
TACGCCCCCA GATGGATTAG AGTCAAGCGG AGGTTGCGCC GGGATGTAGT GGCCTTTGGC
GCAGATTTAG CGACTGCGGG GGCAGTGGCA TTTGAGGACA AGATTGTGCC CACTCAGTAC
ATAGGCGACT TAGATGACTT AAGCGCTGCG GAGGAGCTTG AGAGAGAGCT TAAGTGGTTT
GCCCAACAGT ACAAGCTCAA GGACGTGGTG GCAGTTTGCG ACAAAAACCC GGCGTATGTT
AGCAAAAGGC TCTGCGAGAG CTGGGACGAC AAGTCTGAGG TGCTACAAGT ACAGCACCAC
TACGCCCACG CCCTGGCTGT GGCAGCCGAC GCAGGCATAG ACGGCCCCTT TGTGGCTGTG
GCAATAGACG GCGTGGGATA CGGCGACGAT GGACAGGTGT GGGGCGGCGA AGTGTTGCTG
GTCGAGGGGG CGCGTTTCAA GAGGCTCTAC CACTTGAGGT ACGTATCTAT GCCGGGCGGA
GACGTTTCCA CGAAGTGGCC AGCCAGAATG GCCGTGGCGT ATTTAGTGGA GGCTCTGGGG
CCGGGCGAGG GAGTGGAGGC GGCGTTGCGT TTTGGGCTTC AAAACAGGCT TAGGTGGGGC
GTAGACGAGC TAATGGCTGT GGCGCGGATG GTGCCGCACC CGCTTAAGAC CTCCAGCGTG
GGCAGATTTC TTGACGCTGT GTCGGCCCTC CTGGGGGTGA GCTGGGAGAG GACCTACGAG
GGAGAGCCCG CAATTATGCT CGAAGATTTC GCCAGAGGAG GCACCTCGCT ACCCGTGGAA
ATAGGAATAA AGGGGCGGGA AATCGACGTT GTAGAATTCT TCGCCGAGGT CGTAAACCTA
AGGGCCTCTC CCAAGGACAT AGCGCTTACG GCGCAGCTCT CCTTGGGCAA GGCGTTAGGC
GAGGCGGCGA GAACTGCCGC AGAGTCCGAA GGCGTAGAGC ACGTGGTAGT GGGCGGCGGC
GCCGCCGTTA ACGACTTCAT AATACGCGGA ATAACTACGG CGTTGGGGAA AAGGCCTATA
CTGCCGAAAA GAATACCTCT TGGCGATGGA GGCATAGCAG TTGGACAAGC ATACTTTGTG
TCATACATTG AAAATTAA
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| Protein sequence | MAYRITVIGV VQGVGFRPFI FHLAEKYGVT GYVRNMGGGE VEIWAEGGDV EHFVEELLHK
RPAVIELEEV KVEKVEPAGY KSFEILKSGE AQVVRSEIPP DFAICDACLK EFKGGSRRAG
YYFISCSWCG PRFSVMRSLP YDRERTSWGN FAMCPVCREE YNSLDKGGLR RFYYQGISCQ
HCGPRFTLLD GGGRVVERDP SIAEVAKLVK EGYIVAVKST GGFHLAALAD NDDVVLKLRE
RKMRKRQPFA VMSLEEVLPK LVHLSDEALA ILKSPQRPIL LLPKREGSPV SKWVSPGLSV
EGVFLPYTAY HYELLQGAGF LIMTSANRHG RPTCTSEECV IEQKLADYIL IHNLEIVHRT
DDSVLRFTDG ELVFIRRSRG YAPRWIRVKR RLRRDVVAFG ADLATAGAVA FEDKIVPTQY
IGDLDDLSAA EELERELKWF AQQYKLKDVV AVCDKNPAYV SKRLCESWDD KSEVLQVQHH
YAHALAVAAD AGIDGPFVAV AIDGVGYGDD GQVWGGEVLL VEGARFKRLY HLRYVSMPGG
DVSTKWPARM AVAYLVEALG PGEGVEAALR FGLQNRLRWG VDELMAVARM VPHPLKTSSV
GRFLDAVSAL LGVSWERTYE GEPAIMLEDF ARGGTSLPVE IGIKGREIDV VEFFAEVVNL
RASPKDIALT AQLSLGKALG EAARTAAESE GVEHVVVGGG AAVNDFIIRG ITTALGKRPI
LPKRIPLGDG GIAVGQAYFV SYIEN
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