| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1543 |
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| Symbol | |
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| ID | 4909086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1438522 |
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| End bp | 1440270 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125291 |
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| Product | Cl- channel, voltage-gated family protein |
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| Protein accession | YP_001056427 |
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| Protein GI | 126460149 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.445538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCATTA GCACACTACC GTACTTTGTC AAGTGGATAA TCGTAGGCAC GTTGATAGGC
GTCGTTGCGG CGGTAGCGGC ACTGACATTT ATCTACGCTC TTGAGTTGTG CCAAAAATTT
TTCTTAGAGC AGATCGTAGG TGTTGAGCTC CCGAGGCCTG TGGGCGAGGG CGGCTTGGGC
AACTACACAT TAACTTCCGA GAGACTATGG CTCTTGCCAG TGGCCACAGG CCTAGGAGGC
CTCTTGTCTG GGCTATTGGT CTACGGCCTG GCCCCAGAGG CCGAGGGCCA TGGCACAGAC
GCGGCCATAA ACGCCTACCA CAGACTGAGG GGCCGCATTA GGAGGCGGGT CCCGTTTGTA
AAACTAGTGG CCTCAGCCGT AACCATAGGC TCGGGGGGAA GCGCCGGCAG AGAGGGCCCC
ACGGCGCAAC TAAGCGCAGG TCTTGGCTCA ATAATTGCCG ACATTTTGCG CTTAAACGAC
GACGACAGGA GAATTGTCAC CATGGTTGCC GCCGGCGCTG GCATAGGCAC AATATTCAAG
GCCCCCATAG GAGGCGCACT ATTTGCGGCA GAGGTCTTGT ACAAACGAGA CGTAGAGTCT
GAGGTACTCT TCCCCGCGCT AGTGGCCGCA ATTGTGGGAT ACGCCATCTA CGGCGCTATT
ACGGGCTTCA CCCCAGTGTT CGGAGAAGTC CCAGCGCACT TTGACGTAAG ACAACTGCCG
CTGTTTGCCC TATTGGGCCT CGTCAGCGGA GCTGTCGCAT ATGTGTATGT AAAAGTTTTC
TATTACTTTC ACGATAGGTT TAAGAGCTGG CACACCTCTC CCTATGTAAA ACCTCTTGTG
GGAGGCTTAG CCGTAGGTGC CTTAGGCATC GTCGCGCCGC AGATACTAGG CGTTGGATAT
GGATGGGTCA GCTTACTAAT ACAGGAGTCG CCGTCCGCGT TTTACTCGCC CATTCTCCCC
GCCGTGTTGT TGATTGCCTT GTTGCCACTC TTGAAAATCT TAGCGACTTC TCTCACCGTG
GGCTCTGGGG GTAGCGGCGG AGTATTTGCG CCAGGCTTAG TCATAGGCGC ATTTGTGGGA
TACGACATGT ACCTAGTATT CAAAACGCTC TTCCCCTCGC TGGCCCCCAA CGCCGCTCCA
TTCATTGTAG TGGGCATGCT GTCGCTGTTT GGCGCCGCGT CAAAAGCGCC TTTGGCCACG
GCAATTATGG TAGTCGAAAT GACTGGTAGC TACGATTTAC TGCCAGCCGC CATAATCGCC
GTCGCAGTAG CCCGGCTAGT CTCAGGGGAG GACTCTCTCT ATAGATCCCA AGTGCCAACT
CGGAGAGATT CGCCAGCCCA CTTAGAGGAG TACCACGTGC CATTACTCAT GGAGATGAAA
GTGGCAGACT GCGCCCTCGA CAAAGAGCCA GTGGTAAAAC ACGACGACGA TGTGAAAAAG
GCTGTCACAA TTATGACCAC TAGGAGTATG TCAGCGCTAC CAGTGGTTGA CGACTACGGC
AACTTCCTCG GCGCAGTCTA CCTATTTGAG TTGCTGGGCA AGAGCGGGAG AGTTGGAAAG
TACGCCAGGA AAATCCCACA CGTATCGCCC GAGTCTTCCC TACTAGAGGC TTTACAAGTA
ATAGGCCAGA CGGGTCTTAC ATGGGCGCCT GTGGTAGACG ACGGCAAGCT AATAGGCGTG
CTAACGCTTC AGTCAATAAA CCGCGCATAC ACCCAAAGAC TGGGAAAAGG CAAGAGCGGC
GTACAATAG
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| Protein sequence | MSISTLPYFV KWIIVGTLIG VVAAVAALTF IYALELCQKF FLEQIVGVEL PRPVGEGGLG
NYTLTSERLW LLPVATGLGG LLSGLLVYGL APEAEGHGTD AAINAYHRLR GRIRRRVPFV
KLVASAVTIG SGGSAGREGP TAQLSAGLGS IIADILRLND DDRRIVTMVA AGAGIGTIFK
APIGGALFAA EVLYKRDVES EVLFPALVAA IVGYAIYGAI TGFTPVFGEV PAHFDVRQLP
LFALLGLVSG AVAYVYVKVF YYFHDRFKSW HTSPYVKPLV GGLAVGALGI VAPQILGVGY
GWVSLLIQES PSAFYSPILP AVLLIALLPL LKILATSLTV GSGGSGGVFA PGLVIGAFVG
YDMYLVFKTL FPSLAPNAAP FIVVGMLSLF GAASKAPLAT AIMVVEMTGS YDLLPAAIIA
VAVARLVSGE DSLYRSQVPT RRDSPAHLEE YHVPLLMEMK VADCALDKEP VVKHDDDVKK
AVTIMTTRSM SALPVVDDYG NFLGAVYLFE LLGKSGRVGK YARKIPHVSP ESSLLEALQV
IGQTGLTWAP VVDDGKLIGV LTLQSINRAY TQRLGKGKSG VQ
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