| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1534 |
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| Symbol | |
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| ID | 4909182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1431228 |
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| End bp | 1432238 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640125283 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056419 |
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| Protein GI | 126460141 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00303] conserved hypothetical protein TIGR00303 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0192109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAA AGCCAGCCAT ATTCGCCGTG GTGATTGGGA CTACAGACGT CTCTCTAATC
CCCGGCATAA CTGTTGCGGG GGCTACTCCT GAGCTTACCC ACTATACCCC CGCCTTGGAC
GTGGAATATC TCCTCACCGG GAGGCCTATC ACCCTCGACG TAGTGCCAGT GACGCCCGAC
GGCATTCCCA CCCCCGCGCT TGTCACAAGG GCAGTGGCCT TCGACGTGCC TAAGCTGGTG
GTAAACGCCG GGGCTAGAGT GAGGCCGAGG GTGCCGTATG TGGACTTAGG CGGCGAGCCA
GGCGGGGACA TAAGGAGGGG CCCTGCCATG AGTTGCGCCG CGGCCGAGGA GCTGGCGAGC
AGGGGCAGGA TGCTCGGGCG GGAGCTGGGC CGCCTCGGCG TAGTGTACCT CGGAGAGTCT
ATACCAGGGG GAACCACCAC GGCCATGGCC ATACTAGTGG GGCTGGGATA CAACGCTTGG
GGCAGGACCA GCTCCGCCTC GCCCAATAAT CCAAAGGAGC TTAAGGCCCA AGTCGTAATG
GATGCCCTCG AGAGGGCCAA GCCGCCCCCC GACCCGCTCA GGGTGGTATG CGAGCTGGGC
GACCCGGTCC ACCCCGCCTT GGCGGCAATT GCGCTGGGCG TCGCTGAGGC GGGCGGAGTC
CCGGTATTGG CGGGGGGTAC TCAGATGGCG GCGGCCGCGG CGATTTACAA GGCCATGGGC
GGCGACCTCG CCAAGTTGCA TGTGGTTACC ACTAGGTGGA TTGTGGAAGA CAAGTCGGCG
GACTTCCTCG GCCTAATGGC CGAGGTAGGG GTCAAAAACG TCCACGTGGC CACCGCCTCT
TTCGGCGAGT CGAAGTACGA GGGGCTTAGG GCCTATGAGA GAGGCGCCGT TAAGGAGGGG
GTGGGGATGG GCGGGGCGCT CTTCTACGCC CAGTCCATGG GGCGCGACGT GTTGAAGCTG
GTGGAGGCCG AGTACGAGCG CGTATGGAGA TACGTAAAGA GAGGGGACTA G
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| Protein sequence | MNLKPAIFAV VIGTTDVSLI PGITVAGATP ELTHYTPALD VEYLLTGRPI TLDVVPVTPD
GIPTPALVTR AVAFDVPKLV VNAGARVRPR VPYVDLGGEP GGDIRRGPAM SCAAAEELAS
RGRMLGRELG RLGVVYLGES IPGGTTTAMA ILVGLGYNAW GRTSSASPNN PKELKAQVVM
DALERAKPPP DPLRVVCELG DPVHPALAAI ALGVAEAGGV PVLAGGTQMA AAAAIYKAMG
GDLAKLHVVT TRWIVEDKSA DFLGLMAEVG VKNVHVATAS FGESKYEGLR AYERGAVKEG
VGMGGALFYA QSMGRDVLKL VEAEYERVWR YVKRGD
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