Gene Pcal_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1529 
Symbol 
ID4909088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1427961 
End bp1428902 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content63% 
IMG OID640125278 
Productcobalamin biosynthesis protein CbiG 
Protein accessionYP_001056414 
Protein GI126460136 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00226188 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTCTTG ACCTGCTGTG GAGGGGGGTT GCCGTAGTGT ACGCCTCAGA GGCTGGGCGG 
CATCCCGCCG AGAGAGTGGC CGAGTCGCTG AGGGGGGCGG GCGTGGCAGC ATATATCTTC
AGGTACGGCC AGTTGGAGGA CGTCTGGGGA TGCTACGACG CGTATGTGTT CGTCATGGCG
CTGGGGGGCG TGGTGAGGTG GCTCTGCGGC AGACTGGTGG ACAAGGCGGC GGACCCCCCA
GTCGTGGTGG TGTCCCACGA CTTAGGCCAC GTGGTGCCGG TGGTGGGCAT GCACAGGGGG
GCCAACGGCT TGGCCATAGA GCTGGCGAAG CTTCTTGGCG CAACTCCAGT CTTGACAACG
GCCGCTGAGG CGGCGGGATT TGCGCCCGTC GAAGACCTCG AGAGGGCGCT ACTGTGCGGC
TTAGATCCGC GAGACGCCTT AGAGGTCTAC CGGGCGCTTG CGTTGGGCAA GACGGTGTGC
GTCGACGCCC CTCTTCCACG CCCCCTCCCT GGCTATAGGC AGGGCAACGA CTGCGACGTG
GTGGTGTGGG TGGGTTGCGA TGGGGAGATG TGTTGTAGGC CGTGGAAGAT TTACGCAGGC
TTCGGCGCCA CTTCTACGGC TACCGTAGAG GACGTAGTAG AGGCTATTCT ACAAGCTATG
AAGGCGGTGG GGGCAACGAC TCTGGAGGCC GTTGCGTCGA TAAAGCCTCT CGTCTATCAA
GTGGCCGAGA GGCTGGGAAC GAGGCCCATC TTGCTTAACC CGGGGCAACT GGCGAGGGAT
CGGTGCCTCT CGCCGCCTCT TGAAATCGCC AAGGCTACAG TGGGCGCGGG AAACGTGGCT
GAAGCATCTG CGCTAGCCGC GGCGGGCCCC CGCGGCTTTT TGCTCTACAG AAAGAGATCC
TACAAGCGTC GGGTAACTGT GGCGATAGCC GCATCAACCT AA
 
Protein sequence
MSLDLLWRGV AVVYASEAGR HPAERVAESL RGAGVAAYIF RYGQLEDVWG CYDAYVFVMA 
LGGVVRWLCG RLVDKAADPP VVVVSHDLGH VVPVVGMHRG ANGLAIELAK LLGATPVLTT
AAEAAGFAPV EDLERALLCG LDPRDALEVY RALALGKTVC VDAPLPRPLP GYRQGNDCDV
VVWVGCDGEM CCRPWKIYAG FGATSTATVE DVVEAILQAM KAVGATTLEA VASIKPLVYQ
VAERLGTRPI LLNPGQLARD RCLSPPLEIA KATVGAGNVA EASALAAAGP RGFLLYRKRS
YKRRVTVAIA AST