| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1525 |
|---|
| Symbol | |
|---|
| ID | 4909977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1424769 |
|---|
| End bp | 1425506 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640125274 |
|---|
| Product | precorrin-3B C17-methyltransferase |
|---|
| Protein accession | YP_001056410 |
|---|
| Protein GI | 126460132 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase |
|---|
| TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00108788 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGTA AGATATACGT AGTGGGAATA GGCCCCGGCC ACCCCTCCCA GCGCACCTTC
GCCGCAATTG ACGCCATAGC TAAAAGCGAG GTGGTGGTGG GGTATGAGAC GTATATAAAG
CTGGTGGAGG ACCTCCTCGG GGGCAAGGAG GTGGTTTCGG CCAAGATGCG GCAGGAGGTG
TACAGGGCAG AGGTGTCTAT AGCCAAGGCG CTGGAGGGGA AGACCGTGGC CTTGGTCTCA
GACGGAGATC CGCAAGTCTT CGGCATGGCC CCCCTCCTCT TTGAGATGTT GGCCAAGAGG
GGGATCTCCG TAGATGTGGA GGTGGTGCCT GGCGTAACCG CGGCGCTGGC CGCTGGGGCT
AGGCTCGGCT CGCCTCTAGG ATCAGACTTC GTCGTGTTGA ACCTAAGCCC CCTTCTGACC
CCCGAGGATG TGATTCTCCA CAGGGCGTTG AAGGCCGCAG AGGGCGACTT TGTAATTGCG
TTGTACAACC CCATAGATAG TGGGCTGCTG AGGCGCGTCT TAGAGGTGGT AAAGGCCGTC
AGAGGCCCCT CGACGCCTGT GGGAGTTGTT AAAAACGCCT ACAGAGAGGG AGAGGCGGTG
AAGATAACCA CGTTGGGCGA AGTAGACGTA GACGAGGTGG ACATGCGCAC TATCCTCATA
GTGGGCAACT CTGAGACATT TGTCTGGGGC AGCTACATGA TTACGCCGAG GGGATACAGC
AGGAAGTACC GGCTATGA
|
|---|
| Protein sequence | MGGKIYVVGI GPGHPSQRTF AAIDAIAKSE VVVGYETYIK LVEDLLGGKE VVSAKMRQEV
YRAEVSIAKA LEGKTVALVS DGDPQVFGMA PLLFEMLAKR GISVDVEVVP GVTAALAAGA
RLGSPLGSDF VVLNLSPLLT PEDVILHRAL KAAEGDFVIA LYNPIDSGLL RRVLEVVKAV
RGPSTPVGVV KNAYREGEAV KITTLGEVDV DEVDMRTILI VGNSETFVWG SYMITPRGYS
RKYRL
|
|---|
| |