Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1516 |
Symbol | |
ID | 4908320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1416516 |
End bp | 1417103 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640125265 |
Product | hypothetical protein |
Protein accession | YP_001056401 |
Protein GI | 126460123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000303236 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | TTGAAGACTT TTTTATCTCT ACGCGTGTTA GCTATTGTGA ACAAGGAGGA GTTCTTAGAC CTACTAGAGA AAGACAAAGA GTTTCGCTAT GCTGTAGCTG GCAAGCTGGG GATACTAGAA CTTTTAAGGC GCATGGACGC AGTAGAAAGG GAACTTAAGA GACAGAGAAA GGTGCTAATA ACATTAGTGA AAGAGGTGAG GGATCTAAAG GTGGCCGTGG GATCTTTGGG CAGGAGGCTC GGCGTTGACG TCCGGGCGTT GGTCGACGAG TTGTTGAAGA GGCTGGGGGT CGGGGAGTAC GTGGTGGAGA AGTTTAGGTT TGAGGATAGG GAGGGGAGGT ATGGGCCGAG GGGCGTGGTG TACGAGGTAG ACCTCTACGT GTCTAACGAC AAGACGTTTC TCGTAGAGTT GAAGAGCCTC GTGGAGCCCG AGGATGTGGA CCGCTTCTAC TTAGTGGCAG ACGCCGTGGA GAGAATACTC GGAAGGCGCG CAGAGGGCAA AATAATCGTG GGAGTGCACG CGGCTAGGGA GGCCCTAGAG AGGGCTGAAA AACTCGGCGT AACTCTCCTC TACGGCGATT TGGTCTAG
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Protein sequence | MKTFLSLRVL AIVNKEEFLD LLEKDKEFRY AVAGKLGILE LLRRMDAVER ELKRQRKVLI TLVKEVRDLK VAVGSLGRRL GVDVRALVDE LLKRLGVGEY VVEKFRFEDR EGRYGPRGVV YEVDLYVSND KTFLVELKSL VEPEDVDRFY LVADAVERIL GRRAEGKIIV GVHAAREALE RAEKLGVTLL YGDLV
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