| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1514 |
|---|
| Symbol | |
|---|
| ID | 4909242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1414134 |
|---|
| End bp | 1415138 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640125263 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001056399 |
|---|
| Protein GI | 126460121 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000401583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGGGACAAC TCTGCCGTTG TCGCGGTGGG GTGGCGAGGG GGCTGGGTGT AGGCGCGTCG
TATGGCGGGT TGCCGGCGTT TGGGCTGTTG GGCGCTGGTG GTGTTGAAAA GTTTTTATCT
CTGTGCGGGG GTGTGTCTGT GGATGAGGTG TGGATTGCTC TGTTTGGCCT TCTCGCGACT
GTCGTGGCGC AGATTGTGGG GCTTGCCTAC TGGCTGGGGA GGAAGTTTGC CACTATTGAC
GAGAGGTTTG AGGAAGTGGA CATGCGCTTT AAGGCGGTGG AGAGGCAGAT CGCAGATCTT
AGGGCGGAGA TGGACAAACG CTTTGCCGAG GTAGATAGGC GATTTGCAGA GTTTAGGGGG
GACGCGGATA GGCGGTTTCA AGCTGTGGAG AGACAAATTG TAGAACTTAG GGGCGACGTG
GAGAGGCGGT TTACAGAGCT TAAGGGAGAC GTAGATAGAC GTTTTACAGA GCTGAGGGAA
GAGATGGATA AACGTTTCGC CGAGCTTAGG GGAGAAATGG ATAGGCGGTT TGCGGAGTTT
AGGGGTGAGG TTGAGAGGCG TTTTCAAGGT GTGGAGAAGC GGATTGAGGA GCTGGGGGAA
GAGTTGCGGG GGGAGATTCG CCGGTCTTCT GAGTCTGTCT TATCCGCCGC AGTTGCCATG
AACACCTTTG TGGTGGACTT CGTGGCGTTG AAGGGGCTGT TTACGGAGGG TGAGAGGGAC
TTCGCCAAGG CCCAGCTTAG GGCTATTGCG GGGGTCGCGG CGCCTAACCC CGTGTCTAGG
GAGGAGCTGG AGTTTATAAA GGCGGTCTTC TCTAAGCCTG ATGAGGAGAT CTCCTTTGAG
GAGTTGGACA AGGCGTTGGA CATCTTGTGG CGCTGGTTTT TAGAGACTTA CAAGGTTGAA
GTGTTCAGGG CGTATCTCTA CGCCTATATG ATCAAGGCCT CTCTCTACTT TGAGAGACTG
AAGAAGAAAA AGGAGGGGGG CGGCGGGCCT GGGGCGACTG CCTAA
|
|---|
| Protein sequence | MGQLCRCRGG VARGLGVGAS YGGLPAFGLL GAGGVEKFLS LCGGVSVDEV WIALFGLLAT
VVAQIVGLAY WLGRKFATID ERFEEVDMRF KAVERQIADL RAEMDKRFAE VDRRFAEFRG
DADRRFQAVE RQIVELRGDV ERRFTELKGD VDRRFTELRE EMDKRFAELR GEMDRRFAEF
RGEVERRFQG VEKRIEELGE ELRGEIRRSS ESVLSAAVAM NTFVVDFVAL KGLFTEGERD
FAKAQLRAIA GVAAPNPVSR EELEFIKAVF SKPDEEISFE ELDKALDILW RWFLETYKVE
VFRAYLYAYM IKASLYFERL KKKKEGGGGP GATA
|
|---|
| |