| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1513 |
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| Symbol | |
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| ID | 4909213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1412239 |
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| End bp | 1414137 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640125262 |
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| Product | NADH:flavin oxidoreductase/NADH oxidase |
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| Protein accession | YP_001056398 |
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| Protein GI | 126460120 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000170748 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTAT TTGAGGAGGG CTTTATCGCG GGGGTGAGAG TGCCCAACCG CATTGTAGTG
GCGCCGCTGG GAGCCGGCCT TGCCCAAAAC GGATTCGTCA CCCCGGCCCT CATACAGCAC
TACGTAGAGC TCGCCGAGGC GGAGCCCGGC CTCGTGGTAG TGGAGGGGGC CGCCGTGTCT
GAAGACGCGA GAGACAGCCA CGGGATGTTG GCCATATACG ACGACGCCTT CGTCGGAGGG
CTCAGCCTGC TCGTAGACGA GATCAAGGCT AGGGGGCCCC GGGTGGCCAT CCAGCTCCTG
CACCCGGGCG GCGCGGCGAG CCCCAGGGTG AGGGGGAACG TGCCTGTGGC TCCCACGGCC
ATGGAGTACC TCCTGTTTGT GCACGGGAGA CACGCCTTTA AGGCACACGC GAGGGAGCTC
ACTAGGGAGG AGATAAAGCG GTTGGTTGAG AAATTCGCCG AGGCCGCCGG CAGGGCCAAA
GACGCTGGGT TTGACTTTGT GCAAATAAAC GCGGGTCACG GCTGGCTGTT CAGCCAGTTC
CTATCACCCC GCACGAACAA GAGGAGCGAC GAGTATGGGG GGCCCATTGA GAACAGGATA
AGATTCGCCA TCGAGGTGGC AGAGGCGGTT AAAAGCCAGG GGATACCCCC CATCTTTAGA
ATAGACGCGG TAAACCCCGC ATATGGGGGA GTCACAGAGG AGGAAGTGCT CTACTTCGCC
AAGAGGCTTG AGGAGGCCGG CGCCGCGGCC ATAGAGGCGT CAGGCGGCCC AGCGCCCATA
AGCCCCGCGG TATTCCCACA GGGGCTCTTC CTAGAGGGAG CCGCCAAATT GAAAAAGGCG
TTGAAAATCC CTGTAATTGC CATTGGCGCA TTAGACCACG ACTTGGCCAA CAAGGCCCTA
GAAGAGGGGC TGGCAGACTT CGTGGCCTTT GGAAGAGCCT TTATAGCAGA CCCTCAGTGG
CCTATCAAGC TGAGGCAGGG CAGGCCAGAG GACATACGGC CGTGCGTTAG GTGCAACGAG
TGTATAGACA GGGGGTTTAG CCTCAGGCAA CTGCCGCCCA AATGCGCCGT GAATCCGCAG
TTCCTCAGAT TCGCCAAGCC CAAGCCCCCA ACCCACGTAA AGACGGTGGT GGTAGTCGGC
GGGGGCCCCG CGGGGATGGA GGCGGCCCGG GTAGCCGCCG AGAGGGGGCA CCGAGTGGTC
CTCTACGAGC AGAGCCACCA GCTAGGCGGG AACTTAATAC CCGCCACGGC CTCCCCCTTT
AAACAAGACC TTAGGCGCTA CCTGGAGTGG CTAAGGCGCC AAGTCCACAA GGCTGGCGTA
GAGGTGAGGC TAGGCACAAG GCCCACCCCC GAGGAGATAC TCAGCCAGAG GCCCGACGCC
GTGATCCTCG CCCTGGGGTC AGAGCCGGCA ACCCCCAACA TCCCCGGCAT AGAGCAGGGG
GTATACGCCG TCGACGTCTT ATTGGGCAAG GCAAAGGCGC AGGGCAGAGT GGTCGTCCTA
GGCGGCGGGC GAGTGGGCGG AGAAACGGCG CTACACTTAG CCCTAGAAGG CGCCCAAGTG
GCCATAGTGG AAATCCTCCC AGACATTATG ACAGACCTAG AGCGCAGCTA CAGGCTGGCC
ATGTTAGGCG AGCTCAAGAG GAGGGGAGTC TCCATATATA CAAACTTCCG CACACTGGAA
GTACGCCCGG GGCGCCTCTA CGGACTCCAC AACGGCAACC CCGTGGAGGT GCCCTTCGAC
ACCCTCGTAA TAGCCACTGG AATGCGCCCC AGAGACACAG CCCCCTACAG GGCCCTGGCA
AAACACGGCG TTGAGGTATA CGAGGTGGGA GACTGCGTAA GGCCGAGAAA CCTCTACGCC
GCAGTCCACG AGGCCTACAA CGTGGCCAGC AGACTTTAG
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| Protein sequence | MKLFEEGFIA GVRVPNRIVV APLGAGLAQN GFVTPALIQH YVELAEAEPG LVVVEGAAVS
EDARDSHGML AIYDDAFVGG LSLLVDEIKA RGPRVAIQLL HPGGAASPRV RGNVPVAPTA
MEYLLFVHGR HAFKAHAREL TREEIKRLVE KFAEAAGRAK DAGFDFVQIN AGHGWLFSQF
LSPRTNKRSD EYGGPIENRI RFAIEVAEAV KSQGIPPIFR IDAVNPAYGG VTEEEVLYFA
KRLEEAGAAA IEASGGPAPI SPAVFPQGLF LEGAAKLKKA LKIPVIAIGA LDHDLANKAL
EEGLADFVAF GRAFIADPQW PIKLRQGRPE DIRPCVRCNE CIDRGFSLRQ LPPKCAVNPQ
FLRFAKPKPP THVKTVVVVG GGPAGMEAAR VAAERGHRVV LYEQSHQLGG NLIPATASPF
KQDLRRYLEW LRRQVHKAGV EVRLGTRPTP EEILSQRPDA VILALGSEPA TPNIPGIEQG
VYAVDVLLGK AKAQGRVVVL GGGRVGGETA LHLALEGAQV AIVEILPDIM TDLERSYRLA
MLGELKRRGV SIYTNFRTLE VRPGRLYGLH NGNPVEVPFD TLVIATGMRP RDTAPYRALA
KHGVEVYEVG DCVRPRNLYA AVHEAYNVAS RL
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