| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1504 |
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| Symbol | panB |
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| ID | 4909114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1403827 |
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| End bp | 1404624 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640125253 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001056389 |
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| Protein GI | 126460111 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000131383 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGAAGA GGAAGGTCAC TATTAGACAT TTTCTAGAGG CTAAGGGGTC TAGGAAGTTG
GCCATGGTCA CGGCTTACGA CTACCCCACG GCCAGGCTTG TGGACGAGGC GGGGGTAGAC
GGAATCTTGG TGGGGGACTC TCTGGGCATG GTGGTGCTGG GCTATGAGAA CACGCTCCGG
GTCACTCTGA GGGACATGGT GGCCCACGTG GCTGCTGTGG CCCGCGCCAG GCCGAGGGCC
CTCGTGGTGG CGGACATGCC GTTTATGACC TACGAGACTG GGCCGAGGGA CGCCCTTAGA
GCGGCGGCGA AGCTCGTGAG GGCCGGTGCC GAGGCTGTGA AGCCGGAGGG GGGCGTGGAG
ATTGTGGACG TGGTGGAGAA GTTGACTAAG ACGGGGGTGC CCGTGATGGG ACACATTGGG
CTTAACCCCC AGCGCGTTTT GACCCTGGGC GGATTCAGAA TGGTAGGGAA AGATGAGGAG
GCCAGGAGGA AGGTGTTGGA AGACGCCAAG GCTTTGCAAG AGGCAGGCGC CTTCGCCCTA
GTAGTGGAGT TCGTCCCTGC CTCTCTGGCT AAGGAGGTTA CAGAGGCTGT GAAGATACCC
ACCATATGCA TAGGCGCGGG GCCTCACTGC GATGGGCAAA TCCTCGTGTT ACACGACATA
ATCGGCTTGT CTGAGAAGCC GCCGAGTTTT GCAAAGCGAT ACGCCGACGT GGCCTCGATA
ATTAGAGAGG CCGTGGCTAA ATACGTGGCA GAGGTGCGGG AGGGGAAGTT CCCGACCCCC
GAGCACTACC GCCCATAA
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| Protein sequence | MEKRKVTIRH FLEAKGSRKL AMVTAYDYPT ARLVDEAGVD GILVGDSLGM VVLGYENTLR
VTLRDMVAHV AAVARARPRA LVVADMPFMT YETGPRDALR AAAKLVRAGA EAVKPEGGVE
IVDVVEKLTK TGVPVMGHIG LNPQRVLTLG GFRMVGKDEE ARRKVLEDAK ALQEAGAFAL
VVEFVPASLA KEVTEAVKIP TICIGAGPHC DGQILVLHDI IGLSEKPPSF AKRYADVASI
IREAVAKYVA EVREGKFPTP EHYRP
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