| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1503 |
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| Symbol | |
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| ID | 4909084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1402872 |
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| End bp | 1403780 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125252 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001056388 |
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| Protein GI | 126460110 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000155148 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGCTGT TGACGTTTAG AAAGGGGGGC GTGGCCAAGG TTGGGCTTTG GAAAAACGGG
AAAGTGCTAG ATCTGCCAGA GGCCTACAAG GAGGTCTTCG GCGCCTACGA AGCCCCCGAC
TTTTTATACA GCATGAGGAA GCTAATCGCC GTGGGAGAGC CCGCGCTTGA GGTCGTGAGA
AGGCTGGAGG CAAAGGCCAA GGGCCCCTAC TACTCGCCCG GCGACATTCT GTGGGAGCCC
CCGGTGCCAG ACCCAGAGAA GATATTCGCA GTAGCCGTGA ACTACAAAGC GCACGGCAGA
GAGATGGGCT TTAAGCCTCC TGAGAGGCCC TACTTCTTCC CCAAGTTCCC CAACGCCCTG
GTGGGGCACG AGGGGAGGAT AATCAAACAC AAGGTGGCGC AGAAGGTGGA CTGGGAAGTG
GAGCTGGTCG TCGTCATTGG GAGAGCTGGG AAGTACATAC AGCCCGAGGA GGCCTTGGAC
TACGTCTTTG GCTACGCGGT GGGCAACGAC GTGTCTATCC GCGACTGGCA GTTCCCCGAG
GGATGGCCCC ATCAGCTAAA CCCCTATGGG CAGAACTGGA TTTGGGGCAA GTCCATGGAC
ACGGCGGCGC CGGTGGGGCC TTGGATTGTC ACTAGGGACG AGGTGCCCGA CCCCAACCGC
CTCGACTTGA GGCTGTGGGT AAACGGCCAG TTGGAGCAGG AGGGCAACAC CTCCGACCTC
ATCTTCAACG TCCAACAGTT GATCCACTGG GCCTCCCAAG GCATAACGCT GAAGCCAGGC
GACATGATAT TCACAGGCAC CCCACCGGGC GTAGGGCACT CAAAGGGCAA GTACCTGAGA
GGGGGAGACG TGGTAGAGGC AGAGGTAGAG GGCGTGGGGA GACTTAGGAA CTACGTCGTG
GAAGAGTAG
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| Protein sequence | MRLLTFRKGG VAKVGLWKNG KVLDLPEAYK EVFGAYEAPD FLYSMRKLIA VGEPALEVVR
RLEAKAKGPY YSPGDILWEP PVPDPEKIFA VAVNYKAHGR EMGFKPPERP YFFPKFPNAL
VGHEGRIIKH KVAQKVDWEV ELVVVIGRAG KYIQPEEALD YVFGYAVGND VSIRDWQFPE
GWPHQLNPYG QNWIWGKSMD TAAPVGPWIV TRDEVPDPNR LDLRLWVNGQ LEQEGNTSDL
IFNVQQLIHW ASQGITLKPG DMIFTGTPPG VGHSKGKYLR GGDVVEAEVE GVGRLRNYVV
EE
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