| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1500 |
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| Symbol | |
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| ID | 4909176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1398973 |
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| End bp | 1401543 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640125249 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_001056385 |
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| Protein GI | 126460107 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000790574 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGCTGA GAGAAATAAA AGCTTTGCCA TATGTACAAC ATGTATATCA AGTGTACACT
TTTCATAACA AGAGTTTTAT ATCTATAAAA TTCTATGGAA ACATGGAAAT TTCGAGAAGA
GACTTCGTCA AACTCGCCGC TACTGTTGGC GTTGTTTCTG CGCTTCCGCT GACGCTGACA
TCGGCGGCTC AGCAAACTGC ACAAAAGACG GCCGCGGAGG AGGTGAAAGC GCCTGTGATC
TGCGGCGCGT GTGGAGCAGC GTGCGGCTTA ATCTTTGTCA AAAGAGGCGA CAGAATGTAC
CTCTTGCCCA ACCTGGAGCA CCCCCAGCCC GGCATGTGCT TCCGCCCAGC CTCTGCGCTT
CAGCTCTGGA ACCACCCCCT CAGGCTGAAG AAGCCTCTAA AGCGCGTTGG AAACAGGGGA
GAGGGGAAGT TCCAAGAGGT GGACTGGGAC ACTGCGTTGA ACGAAATTGC ACAGAAGCTC
AGAGACATAG TGAACAAGTA CGGGCCAGAG AGCGTCGCCT TCACTAGACA CGACGTACAC
TCTTGGATAC TGCCCTTCAT AGCCAGCGTC TTGGGGACTC CCAACGTGGT GGGGCACGAG
GGGACTTGCC ACAACGCCCC CACCGTGGCC AGGGGGTTTG TCCTAGGCGC AGGAGGCCCG
CCCTCAGTGG ACCCAGACTA TGAAAACGCC ACTTACATCC TCCTGGTGGG GAGGAATTTA
GACGCCGCGA TGGGCCTCGT GAGGCAGGTG GCCAAGGCTA GGGAGAGGGG GGTGAAAATT
GTCGTAGTTG ACCCAAGGGC CCCCAACTTG GCCTACTCCT CGGTGGAGTG GGTGCCCATA
ATCCCAGGCA CAGACACGGC CTTCGTACTC TCTCTCATAA ACGTGATAAT AACCCGGGGC
CTCTACGACG CCGCGTTTTT AAAGAAGTAC ACCAACGCCC CGTTCCTCAT TAAGCCAGAC
GGCAAGCCGC TCACTGAGAA AGACCTAGGC GGCGAAGGCT CGGCCTACCT CGTCTACGAC
AATGCGACTA AGTCCCTTGT GCCACATGAC AAGGCCCAAG ACCCGGCCCT GGACTACGAG
GGCGTTGTTC AAACGCCGCA GGGCGAGGTC AGAGTAAAGA CGGCGTTTAA GCTCTTGGCC
GAGAGGGCGG CTAAGTATCC GCCAGAGGAG GCCGAGAAGA TAACCGGAGT CCCCGCGGCC
GATATTCGGA GAATTGCCGT GGAGTTCGCC ACGGCGAGGG GCGTGGCAGA GGACGGGTGG
TACGCCGCTA AAAACGGCAA CGAGCTCGAC TTGTACATGG CAATCCTCAT CTTAAACGCC
CTAGTGGGCA ACATAGACAA GAGAGGCGGC CTCTGCTTCC AAGAAAGCGC CAAGTACCCA
AACGCGGTTA CCACCGCGGC GGGGAAAGTG GTGACGATAT TCCAAGTATG CGACGTGGGC
ATAACCGCGC AAGAGCTCCC AGCGCCCAAG GCCCAAAGAG TGGACAAGGT GGCATACCCG
CTTGCGACCA GCGTCTTTGA CGCATTGCTC GACGCAATAA TCACTGAGAA GCCCTACCCG
ATAAAGGCCC TCTTCATAGT GGGCACTGCG CCTTTCACAA GAGACGTCAA TACGGAGAAG
CTCAAGCAAG CCTTAAGCAA GTTGGAGCTA GTGGTGGCCA TAGACATACT GCCGCAAGAC
CACGTGGATT GGTGCGACTA CGTACTGCCA GACCTCATGT TCCTCGAGCG CGGCGAGATG
GGGACTATGA AGTGGAGTCT ACACGCGGGC GTAGTCTACT CGGAGAAAGT GCTCGACCCG
CCCCCCGGCG TAGATGCGAG AAACGCCTTC TGGGCCTTGA TGGAGATCAT CAGGAGGGCC
TTCCCAGAGA AGGCCGCCGC CGTGGGCTAC ACGGAGAAGT ACGCAGACCC ACACGCCTTT
GAGGAATACG AAGAGGCCAT TAAGAAGGCC GTAATCATAA GTCTGGCAAA TGCGTGGAAC
CTAGACCCTG CGAGGCTGGA GGAGGAGCTC AAGGCCAAGG GGTTCTACGT CTTTAAGAAG
AAGTCTTACG AGGCCAGGCC GTATAAGACG CCCCTGGGCA CTCCGAGCGG GAAAGTGGAA
ATCTACGCGC TGAGGGCTCT GCAGTACAAC AGAGACCCAC TGCCCGACTG GAGGCCGCCT
CTGTACAAGG TCCCAAGCGC CCCCGACGAG TTCTACCTAG TAAACGGGAA GGATCAAATC
ATAAGCGCGC ACATGGTCAT GGTGAAGAAC GCCAAGTGGA TCGTGGATAG GACTGTGTGG
ATGAACCCCG TCGACGCCGA GCGGCTAGGC GTCAAAGACG GAGACGTGGT GGAGCTAGAG
GGCTTAGACA ACGGGTTTAA GGCGAAGGCC GTGGTAAAGG TGACAAACCG CGTTAGACCA
GGGGTGTTGT TCACATACGC AATGGCTGGG GGTAGGACGA GTAGGCTACT CACTGGCGAG
TACGAGTTCC TCCGCGAGGG CGTCAATCCG GAGTGGTTTG CCAGCGGCAA GCTAGAGCCG
GTGAGCGGTA GCGCTGCTAC AAACGCAAGC GTTCGGGTGA GGAGACTATG A
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| Protein sequence | MGLREIKALP YVQHVYQVYT FHNKSFISIK FYGNMEISRR DFVKLAATVG VVSALPLTLT
SAAQQTAQKT AAEEVKAPVI CGACGAACGL IFVKRGDRMY LLPNLEHPQP GMCFRPASAL
QLWNHPLRLK KPLKRVGNRG EGKFQEVDWD TALNEIAQKL RDIVNKYGPE SVAFTRHDVH
SWILPFIASV LGTPNVVGHE GTCHNAPTVA RGFVLGAGGP PSVDPDYENA TYILLVGRNL
DAAMGLVRQV AKARERGVKI VVVDPRAPNL AYSSVEWVPI IPGTDTAFVL SLINVIITRG
LYDAAFLKKY TNAPFLIKPD GKPLTEKDLG GEGSAYLVYD NATKSLVPHD KAQDPALDYE
GVVQTPQGEV RVKTAFKLLA ERAAKYPPEE AEKITGVPAA DIRRIAVEFA TARGVAEDGW
YAAKNGNELD LYMAILILNA LVGNIDKRGG LCFQESAKYP NAVTTAAGKV VTIFQVCDVG
ITAQELPAPK AQRVDKVAYP LATSVFDALL DAIITEKPYP IKALFIVGTA PFTRDVNTEK
LKQALSKLEL VVAIDILPQD HVDWCDYVLP DLMFLERGEM GTMKWSLHAG VVYSEKVLDP
PPGVDARNAF WALMEIIRRA FPEKAAAVGY TEKYADPHAF EEYEEAIKKA VIISLANAWN
LDPARLEEEL KAKGFYVFKK KSYEARPYKT PLGTPSGKVE IYALRALQYN RDPLPDWRPP
LYKVPSAPDE FYLVNGKDQI ISAHMVMVKN AKWIVDRTVW MNPVDAERLG VKDGDVVELE
GLDNGFKAKA VVKVTNRVRP GVLFTYAMAG GRTSRLLTGE YEFLREGVNP EWFASGKLEP
VSGSAATNAS VRVRRL
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