| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1498 |
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| Symbol | |
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| ID | 4909294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1397544 |
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| End bp | 1398416 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125247 |
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| Product | polysulphide reductase, NrfD |
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| Protein accession | YP_001056383 |
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| Protein GI | 126460105 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00036667 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGCGT TTCAAGAGAT TTGGAACCCC TGGCTCATAG GGCCGTTCCT CTGGCTAGCC
GGCATTAGCG GAATGACGGC CGTGGCCTAC GTATTGCTAA AGTGGAGCGG CGTAGAGGAG
AAGAGGAGGG AGCTGAGCTG GGTGACCTTT ATCTCCCTCG CGCTAGCGCT TGTGTTTGTG
GTAGCAGACT TGTCTAGGCC GTGGAATATG CCCTCGGCAA TCATGAGCGC GGTGTTCGGC
GGAACCTTCG GCTGGACGAG AAGCTGGATG GCCGTGGGCA TAGCCCTGCT GTTGGTAATG
CTGGTGTTAA CTCTCTTAGT GGCACTGAGA CACGCCGGGA TCGGGGCGTT GAGGCCGCTG
GTAGACGCCA AGTGGTATGA CGCACTGCTT CTGCTAGTGG GAGTTGCGGT GACAATATAC
AGCGGGTTCT TAATCGCCGC GGCGCCGGGG GTGCCGTTTT GGAACACGGC GCTGATACCC
GTGCTGTGGA TAATAAGCGC CTCAGTGTGC GCAACGGCGG TGGTCAAACT GTTGGTGCAC
TCAGAGGCTG TGTCAAAGGC CGCCACGAGG TACGGCTTCG CCTTAGACGC GGCGGAGTTG
CTGGCGGTGT TCGCCTTAGT CAGCCTCGCC CTCTACGGGG GCAGTAGGGC GGCTAGGACA
AGCGCAGAGG CTTTGGCATA CGGCGATTTG GCCGCGCCTT TTTGGATAGG CGTAGTGGCG
CTGGGGATAT TGGCGCCATT ATTCATAGGC CTCTACCTCG CCAAGAGGGA GAACAAATAC
CTCGCCGCTA CAGCCGCCTT GCTGGCACTA ATAGGCGCCC TACTGCTGAG GGTATTAGTA
CTACAAGCTG GAGTTTTTGA AGCGCCAGTG TAA
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| Protein sequence | MTAFQEIWNP WLIGPFLWLA GISGMTAVAY VLLKWSGVEE KRRELSWVTF ISLALALVFV
VADLSRPWNM PSAIMSAVFG GTFGWTRSWM AVGIALLLVM LVLTLLVALR HAGIGALRPL
VDAKWYDALL LLVGVAVTIY SGFLIAAAPG VPFWNTALIP VLWIISASVC ATAVVKLLVH
SEAVSKAATR YGFALDAAEL LAVFALVSLA LYGGSRAART SAEALAYGDL AAPFWIGVVA
LGILAPLFIG LYLAKRENKY LAATAALLAL IGALLLRVLV LQAGVFEAPV
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