| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1495 |
|---|
| Symbol | |
|---|
| ID | 4909272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1395253 |
|---|
| End bp | 1395837 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640125244 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001056380 |
|---|
| Protein GI | 126460102 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0303908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCCAAG TCAAAGACGG CCAAGGCAAA AAGTACGCCT TCCTCTGGAG CGTTTCCAAG
TGCATCTTCT GTGGAGCCTG TGTGGCTGCC TGCAACGCGG TAAACTATGG AAGAGACAAG
TCTCCAAACG CGTCGTGGGG GTGGCCTCAG GCAAATACAA AAATAGTTGA AACAGAGCAC
GGAGATTTGC CGCGCTTTAT ATTTATACAG TGTCAACACT GCGAAGATGC GCCTTGCGTC
CGCAACTGCC CCACTGGCGC CTCCTACGTC GATAAAGACG GGGGCATTGT GCTAGTGGAC
TACAACCTCT GCGTCGGCTG TAAGTACTGC ATATCTTCGT GCCCCTACGA CGCCAGGTGG
ATAAATAAAG AAGGCACGCC CTCCAAGTGC ACTTGGTGCA TCCAACGGGT AAAGAGTGGG
GGGCTCCCCG CCTGCGTCGC CTTCTGCCCA GTGGGGGCAA GAGACTTCGG CGACATAAAC
GACCCCAACT CCTCAATCTC AAAGAGGCTG GCCGCCGCCA AGCGGGTCTA CGTACTAATG
CCAGAGAAAA ACACTAAGCC CAAGTTCTTC ATCGTGGAGG AGTAA
|
|---|
| Protein sequence | MGQVKDGQGK KYAFLWSVSK CIFCGACVAA CNAVNYGRDK SPNASWGWPQ ANTKIVETEH
GDLPRFIFIQ CQHCEDAPCV RNCPTGASYV DKDGGIVLVD YNLCVGCKYC ISSCPYDARW
INKEGTPSKC TWCIQRVKSG GLPACVAFCP VGARDFGDIN DPNSSISKRL AAAKRVYVLM
PEKNTKPKFF IVEE
|
|---|
| |