| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1494 |
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| Symbol | |
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| ID | 4909329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1394276 |
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| End bp | 1395253 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640125243 |
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| Product | respiratory nitrite reductase specific menaquinol--cytochrome-c reductase complex subunit NrfD |
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| Protein accession | YP_001056379 |
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| Protein GI | 126460101 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0589179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAGG AGTATTGGGA CGCCTTCTTA ATAGGCCCCT TCCTATTCTT CGCCGGGCTA
GTCGGCATGG GGATGGTGGC CATGTCAATT TTCAAGCTAA GGGGAGAGGA GCTACGGTAC
GAGACGCTGA CCTACGTGCT ACTGGCCTCG ATCATACTTG CCCTCCTCTT CGTAATGGGA
GATCTCTCAA GACCACCCAC AGTCATGATG TTCGCCATGT TGAACTCCTT CCTAGAGCTT
AGATACAACT TCCTCTTCCC ATTCCTAAGG GGGGAGTTGC GATTTTCCTG GATGGCACTC
GGCATAGTCA TGTTAATACT GGCGCTTCTC GTAGTGGCCA TATGGGCACT CCCCTACCTA
GTAAGACGAA TCCAAGCCGC GCTCCCACAG CCTTTGGCAA AGCCCCTCGC GCCACTACTA
GCCCTCTTAG ACAAAATCGC CACGTGGCTA CTGGCACAGA GGTGGTACTA CTACCTAGCA
ATGGCCATCG GAGTATTGGT GACGTTGTAC AGCGGCTTTT TAATATCTGA AGCAAAGGCA
GTGCCGTTTT GGAACACGAC GCTCTGGGGA ATCCCCGGCA TACCCACCAT ATGGATATTC
AGCGCCACGG CGGGGGCCTT AGCCCTCATA AGAATGTACC ACTTAGACAG AGAACACCTA
GTACACACCA CTGAGAAATA CGGCGTCTTA TTTGAAATAG GCGAAGTCGC CGTGATATTC
CTCTTCCTCT ACAACGCCCT AAACTCCGCC TCATTCGCGG CAAGAGAAAG CGCACACGCA
GTGCTGTGGG GCGAGCTAGC GCCGATCTTC TGGGTCTTCG TAATCGGCCT CGGAATCGTA
ACCCCCCTCG CCACAGCCGC GCTGTCAAAA ATTAGGCACA GCCCCAAGTT AACTTACGCA
GGATGCGTCG CCGGCCTCTT CGGCGCACTA GCCCTAAGAA CGCTAGTGGT ATACGCTGGA
ATTCCAGAAC CATTATAA
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| Protein sequence | MFQEYWDAFL IGPFLFFAGL VGMGMVAMSI FKLRGEELRY ETLTYVLLAS IILALLFVMG
DLSRPPTVMM FAMLNSFLEL RYNFLFPFLR GELRFSWMAL GIVMLILALL VVAIWALPYL
VRRIQAALPQ PLAKPLAPLL ALLDKIATWL LAQRWYYYLA MAIGVLVTLY SGFLISEAKA
VPFWNTTLWG IPGIPTIWIF SATAGALALI RMYHLDREHL VHTTEKYGVL FEIGEVAVIF
LFLYNALNSA SFAARESAHA VLWGELAPIF WVFVIGLGIV TPLATAALSK IRHSPKLTYA
GCVAGLFGAL ALRTLVVYAG IPEPL
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