| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1492 |
|---|
| Symbol | |
|---|
| ID | 4909064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1391903 |
|---|
| End bp | 1392607 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640125241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001056377 |
|---|
| Protein GI | 126460099 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.198935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAGGC TACAGCGGCT GAGAAAGGCG CTTACTCCCA GGACTGTGGC ACTGCTGTTG
TTAGCCGCGG CGGTGGTCGC CGGAGTCGGC TTTTGGCTGT ACTTGAGGTA CGACCCCGGG
TCATCGGCCG TGTGCGCCAC CTGCCACAAC ATGCTCCCCT TCATCGCCAA CATTAAAAAT
ACGCCGCATG GGGGAACCTC CTGCGCCACC TGCCACTCCA TAGACCTACT CCGCTGGATC
TACGTACAAG CAGTGGAAAA CCCAACTCCC CAACAAATAG CGGCGCGATA CGCCCAGCCC
ATGTTCGACC AGTGTCTCAC CTGCCACACA GCCCAGTCCT TCTCCCAGTT AAACATCCAC
GAGGCGCACG CCCAGCTGGC AGACAGGCTA AAGAGCTGCA CCCTCTGCCA CAACCCCCAC
GACTCCGCCA CCACAAGCGC CAGATGTCAG ACCTGCCACG ACTACAACAA AGTGTTAAAC
ACCCACATGG TCTTCCACGA CTCCGCCTGG GCCCAAGTAG ACATGGGCAA ATACGAGGTA
TGCCTAGAGT GCCACAGTCC GTGGTCCAGG TGGTATGTCC CAATAGGGCC AGACTGCCAA
ATAGGCGCAG GCAAGGGAGT CCCATGCATA GGGTGCCACG GGCCCAGAGC CATGGGCTTT
AGCCCAGCCG ACTTCCTAGA CTGCGCCAGA TGCCACGGGC GCTAG
|
|---|
| Protein sequence | MGRLQRLRKA LTPRTVALLL LAAAVVAGVG FWLYLRYDPG SSAVCATCHN MLPFIANIKN
TPHGGTSCAT CHSIDLLRWI YVQAVENPTP QQIAARYAQP MFDQCLTCHT AQSFSQLNIH
EAHAQLADRL KSCTLCHNPH DSATTSARCQ TCHDYNKVLN THMVFHDSAW AQVDMGKYEV
CLECHSPWSR WYVPIGPDCQ IGAGKGVPCI GCHGPRAMGF SPADFLDCAR CHGR
|
|---|
| |