| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1479 |
|---|
| Symbol | |
|---|
| ID | 4909496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1377858 |
|---|
| End bp | 1378238 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640125228 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_001056364 |
|---|
| Protein GI | 126460086 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0517] FOG: CBS domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGTG GAGAAATTGC CTCTAGGCCT CCCATCACCA TTACCCCAGA CAAGACGCTG
GAGGAGGCCG TAGAACTTCT CTCAAAACAC GACGTTGGGA TACTAGTGGT AGTGGATAGA
GAAAACCCAA GGAAGCCCAT CGGCGTGATA TCGGAGAGAG ACGTGGTAAG AGCCCTGGCC
TGGAAGGCGC CTCTCACAGT CACCGTGAGA GAGGTCGCCA CCACCGCGGG GCTCATATAC
GTCTATGTAG ACGAGCCGCT GGAGGAGGCG GCCAAGAAGA TGGAAAAACA CCGCATAAGA
CATGTACTCG TGCTGGAAAG AAGCGGAGAT CTATACGGCG TCATATCTAT AAGAGACCTG
CTTAAACACT GCAAACTCTA G
|
|---|
| Protein sequence | MKCGEIASRP PITITPDKTL EEAVELLSKH DVGILVVVDR ENPRKPIGVI SERDVVRALA
WKAPLTVTVR EVATTAGLIY VYVDEPLEEA AKKMEKHRIR HVLVLERSGD LYGVISIRDL
LKHCKL
|
|---|
| |