Gene Pcal_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1468 
Symbol 
ID4908964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1368127 
End bp1368432 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content64% 
IMG OID640125217 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001056353 
Protein GI126460075 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGGG CGGCGGCCGC CAAGCTGGGG GAGCTACCCG ACAAAAGGCC TGTTCCCAAG 
ACGGTGGAGG CCACGCCGCT CGTCCTCGTC CGCGACGGCG AAAGAGTATA CTGCGCCTAC
GGCATATGTC CACACGGCAG GTGGCTCCTC AGCCTCGGCG ACTATAAGGA GGGCAAACTG
AGGTGCAAGG GCCACGGCTC CGTCTACGAC TTGGCCACCG GCGCGGGGGA GCTCAACGGC
TACCCGCTTC AGATAAAGGC GTACAAGGCC GAGGTCGTGG GCGACAGCGT GTACGTGGAG
GTTTAA
 
Protein sequence
MVRAAAAKLG ELPDKRPVPK TVEATPLVLV RDGERVYCAY GICPHGRWLL SLGDYKEGKL 
RCKGHGSVYD LATGAGELNG YPLQIKAYKA EVVGDSVYVE V