| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1465 |
|---|
| Symbol | |
|---|
| ID | 4909375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1365770 |
|---|
| End bp | 1367473 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640125215 |
|---|
| Product | acylphosphatase |
|---|
| Protein accession | YP_001056351 |
|---|
| Protein GI | 126460073 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase
[COG1254] Acylphosphatases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCAA TCGAGCGTTT TAGGGAGAGG GTCAAGCTGT ACCGCGAGGC GGGCATCGCC
CTGGAGTCTC TCTCGCTTGG TTGCTCTGTG AAGGTGGACC TCTACGACGT GTTGTACCCC
GCCATCCAGC TCCTGAGGGA CGAGGTGTCG AAGCTCAACC TAGTCATTGC CCCCAGGGAG
GACGCGGCCA TTGTAAGGGG GGAGGAGGCC CAGCTGATGA GGGTCTTCCT CGACGTGGAG
AACCCACAGC TCGACGCCGC GGCTGTGGAG TCCTTTGCCC CCTCTCTGGC GGTGGTGCTT
GTGCAACTCT ACATGGCCAA GGCCGCTTCG GCGGAGAGAT TCGCCGAGTA CGCCGCGAGG
CTCTACAAGG CGCTTGGCTC CACCCGGCAC AGGGTGTGGC TCGGCAAGGG GCACAGCATA
GTGAGCACGA AGCAGGGCGC GGAGTTCTTC ATGGTAGACT TCTTAAAGAC CTACGGCGAG
GGGGGCTACA TCCTCGCCAA CAACGACACT ATCCAAGTGA TAGACCCCTC CGAGGACTTG
GACTCCCCAC TCCAGGTGGC CGTGGCGATA AACAACGCCC TCAACGACCT CTACGTCAAA
GGCGTCTACA AAGACGTCCA CATAGCCCCC ATATACGACG CGCCTGAGCG CTGGTACGAG
GGGGTGGAGA AGAGCTACCT AGCCCACGCC TCTAGGCTGG GCAAAGTGGT GGAGGCCCCC
CTCCCCCGCC GGGGCTACCT CCTCCTGGGC GCCACGGCGT GGGGCTACCT GGACAGGGAG
CCCCCCACCT TCTACAGAGA GTTGGACAGA GGGTTCGTGG TGGTGGTCAC TAGGCCCTTC
GGGGAACTTG CCTACTTCAC CACCTACGTG GCCATCCACG CAGACGAGGA GCTTCTAAAG
GCCTTCGAGT CCTCGGTGAT GCCCCTTGAG GAGTTTGAGA GAGAGAAGAG GAGAGTCCTC
GAGCTTATGG CCACTCCCAA CGCCGAGGTG GCCAAGGTGA TATACCGCCA CCTGCCGGGG
CTGGGGGAGA GGTTTAGGGC TGAGGATCAC ATAGCCGCGA CGATAGACGT CTCGGGGCCC
GGGATCTTCG TCTTTAAAGA GGTGGCGGAG AAGGCCGGGG TAGACATAGA GCTGTTCGAA
GTGCCCCTCC TCAACCCCAA GCTCTCTAAA TTCGCCGCAG ACTTCTACAT TATGCCCGAC
GCCACCGCGG GGACCAACGG CGCGGTGGCC CTGTTCCTCC ACGAGTCTCT GGCAGAGGAG
GTGGTGAAGG AGCTGTCCAA GATCCCCCAC CTATCCCCCA GGGTGGTGGG CAGAGTGGTG
GGCAGAGGCG AGGGGCGGCT CCACGTCCCC CCGGAGGCCC TGTCCTACAT ATCCAATAGA
AAGCTCAAGG AGAAGTTGGC CGCCCAGGCG CCCATCCTTG CGGGGCTGGG GGTGGCCAAG
CCGGCGAGGG CTAGGATCTA CGTGGAGGGG GACGTGCAGG GTGTGGGCTA TAGGCCCTAC
CTAAGGTCTA GGGCCCGGGT GCTGGGCTTG ACGGGCTACG CTAGAAATCT CCCCGACGGC
CGCGTGGAGG TGGTTGTGGA GGGCGACGCA GACGCCATTA GGAAATTCGC AGAGGAGGCC
TGCAGGGGGA GGGAGAGGTG TAGAGTGGCA GAGACCCAGT GGGAAAGGTA TTTGGGGGAG
TTCAAAGACT TTGAAATTTT ATGA
|
|---|
| Protein sequence | MSPIERFRER VKLYREAGIA LESLSLGCSV KVDLYDVLYP AIQLLRDEVS KLNLVIAPRE
DAAIVRGEEA QLMRVFLDVE NPQLDAAAVE SFAPSLAVVL VQLYMAKAAS AERFAEYAAR
LYKALGSTRH RVWLGKGHSI VSTKQGAEFF MVDFLKTYGE GGYILANNDT IQVIDPSEDL
DSPLQVAVAI NNALNDLYVK GVYKDVHIAP IYDAPERWYE GVEKSYLAHA SRLGKVVEAP
LPRRGYLLLG ATAWGYLDRE PPTFYRELDR GFVVVVTRPF GELAYFTTYV AIHADEELLK
AFESSVMPLE EFEREKRRVL ELMATPNAEV AKVIYRHLPG LGERFRAEDH IAATIDVSGP
GIFVFKEVAE KAGVDIELFE VPLLNPKLSK FAADFYIMPD ATAGTNGAVA LFLHESLAEE
VVKELSKIPH LSPRVVGRVV GRGEGRLHVP PEALSYISNR KLKEKLAAQA PILAGLGVAK
PARARIYVEG DVQGVGYRPY LRSRARVLGL TGYARNLPDG RVEVVVEGDA DAIRKFAEEA
CRGRERCRVA ETQWERYLGE FKDFEIL
|
|---|
| |