Gene Pcal_1462 details

Gene Information

• Locus tag: Pcal_1462
• ID: 4909430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1364169
• End bp: 1364756
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640125212
• Product: hypothetical protein
• Protein accession: YP_001056348
• Protein GI: 126460070

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAGTGTAA AGAGGGATAG GGTAAACATA GCTGTGGCTA GGGAGGTGGC TGAGGAGTTG 
GGGAACGTGG CGGAGTCCCT CGGCATGACC CAGTTCGCCC TTGCCAACGA CATACTCACA 
GTGGGGCTTG AGGCAGTCAA GGCGGGGTAC AGGGTCTCGC AGATAAGGGA GCTCCTCCAG 
TTCTACAAGC TGATGGTGGA GCTGGAGATT GTGCCTATCC CAGGCCGCCT CCTCGACTCA 
ATCGTGGCTG AGCACTACAG GAAGGACAAG GAGGGCGCGC TTAAGGTCTG GTGCGAGGCG 
GGGAGGATGC TGGGTAGCTA CTTGAGGGCC ACCTTCGGAG GGCTAGAGGA GGTGTCCCAG 
CTCGTGCCCT ACTTGGCCAA GATAGTCCCC GCGAAGCGTT TTGAGCTCAA GGTGTCGAAG 
GGCGAGGCGG TTTTGGAGAT AGTAGGAGTG GGCTACAGCT TGGAGGCCGT GGAGGTAAAC 
GCCGCCGCGG CTAAATGCCT CTTCGACTCC TACGGCTACG AGGTGGTGGA ACAAGTGACG 
GCCCCCGGAA TCTTGGTGGT AAAGGCCAGG GAGAGGGAGG CAAAGTAG 

 

Protein sequence

MSVKRDRVNI AVAREVAEEL GNVAESLGMT QFALANDILT VGLEAVKAGY RVSQIRELLQ 
FYKLMVELEI VPIPGRLLDS IVAEHYRKDK EGALKVWCEA GRMLGSYLRA TFGGLEEVSQ 
LVPYLAKIVP AKRFELKVSK GEAVLEIVGV GYSLEAVEVN AAAAKCLFDS YGYEVVEQVT 
APGILVVKAR EREAK