Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1453 |
Symbol | |
ID | 4910229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1356123 |
End bp | 1357283 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640125203 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001056339 |
Protein GI | 126460061 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAA AGGTGTTGGT TCTGGGCGGT GGAACTGGCG GCTTAATGAC TGTGAAGGAG CTTAGGGAGA GGTTTGGGCC GGGGGATGTG GAAATAACGC TCATAGACGC CAAGGATAGG ACGGACTTTA GGCCTTCGTA CCTCTACGTG GCTTTTGGCT ACAGGAGGCC GGAGGAAGTC TCTGTCCCTC TTGAGCACGT AAAACGCCAC GGGGTAAATT TTGTGAAGGC CAAGGTGACA GCCATAGACG CGGCCAATAG GAAGGTGAAG ACGACGGCCG GGGAGTTTAC CTACGACGTG TTGGTGGTGG CCCTCGGCGC AGAGACCGTA GAGACTGGGT TCCCCCACAC GTGGGAGCTA GAGCCTTCTC TCAAGGTTGC CGAGGCCCTC GCCCAGGTGA AGCAGGGGCA CATCGTCATC GGCGTTTACT CTCTGCCCTA CCGCTGTCCG CCAGCCCCCA TCGAGCTGGC AATGCTTACC CACTTCTACT ACCTAACCCG GGGACTGAGA GACAAGGTCA AGATAACTGT GGTGCACCCG CTCAAGAGGC CCTTTGAGAA CTTTGGCCCA ATGGCGGCCA AGTGGATGTC CGGCTTCCTA CAGCAGCTGG GGATTGAATA CGTCGGCGTG GGGCAGTCCA CGGCAATCAA GAGCTTGGGC AAGAGCGAGC TGGAAACCAC CACCGGGGAG AAGTTTAAGT TCGACGCGGC CTTTATTGTC CCGCCGCACA AGGCGCCGGA CCCCGTGCTC AACAGTGACT TGGCTAAAAA TGGGTGGGCG GCGCCTCGCA ACCCCGCCAA CGGCGACTTT AGAAGCGCAA AATACGACGA CGTATACGTA ATAGGCGACG TTGCCGCTCC CAACGTCCCA GTGGGGATGG CTGGGACAAT TCTACACAGC TACATGCCCT GGGTTATAAG CAACATAGCC GCCGACCTAT TCGGCGTATA CCTCGGGAAG CCCCCGTTTA GAATTGTTGG CACATGCGCC TTAGACGTGG GGGCCTTTGG AATGGCCGCT GCCTGCGACT TCACGCCGTT TGTGAAAAAG CAGAAGCCGT ACCCCGACTG CATGTTCCTT CCGCCAGCAC CTGCGACGCG ATTGTTCAAG GAGATGTTTG AGAAAGTGTA CTTCAACTGG CTTCTGGGGG TAGTGCCATG A
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Protein sequence | MPKKVLVLGG GTGGLMTVKE LRERFGPGDV EITLIDAKDR TDFRPSYLYV AFGYRRPEEV SVPLEHVKRH GVNFVKAKVT AIDAANRKVK TTAGEFTYDV LVVALGAETV ETGFPHTWEL EPSLKVAEAL AQVKQGHIVI GVYSLPYRCP PAPIELAMLT HFYYLTRGLR DKVKITVVHP LKRPFENFGP MAAKWMSGFL QQLGIEYVGV GQSTAIKSLG KSELETTTGE KFKFDAAFIV PPHKAPDPVL NSDLAKNGWA APRNPANGDF RSAKYDDVYV IGDVAAPNVP VGMAGTILHS YMPWVISNIA ADLFGVYLGK PPFRIVGTCA LDVGAFGMAA ACDFTPFVKK QKPYPDCMFL PPAPATRLFK EMFEKVYFNW LLGVVP
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