Gene Pcal_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1452 
Symbol 
ID4910150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1355698 
End bp1356126 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID640125202 
Producthypothetical protein 
Protein accessionYP_001056338 
Protein GI126460060 
COG category[S] Function unknown 
COG ID[COG2427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG TAGTCACAAT ACCCAAGGCC GACTACGAGA GACTTCTGCA GGAGGTGCAG 
GCCCTGCGCA GGGAGGTGGA GGAGTTGAGC TCCCTCCTCC TCCCAGTAAA GATCGTGCTG
GAGAAGTTGC CCCACCTAAT GGCGGACATA CAGGTGTTCA AAGTGGCGGC GCCGCTCATC
TCCATGTTGT CCATAATGGA CTCGGCTGAC TTGAACGCCT TGGGCGCCGC CATGCAGGGA
GGCGTGGTCT GCGCCAGCAA GGCGTTGAGA CAGGTGGCCG AGGACGGGGC GCCGCGTGTG
GGGCTCTTCG GCCTCCTCTC CGCCATGCGT GACCCAGAGG TGCAGAAGGC CATGGGCCTC
ATGGTGACTC TGCTAAAGGC CATGGGCAGT TGCATGGAGG AGAACCTAAA ACAGGTAAGC
GAGAAGTAG
 
Protein sequence
MSEVVTIPKA DYERLLQEVQ ALRREVEELS SLLLPVKIVL EKLPHLMADI QVFKVAAPLI 
SMLSIMDSAD LNALGAAMQG GVVCASKALR QVAEDGAPRV GLFGLLSAMR DPEVQKAMGL
MVTLLKAMGS CMEENLKQVS EK