Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1452 |
Symbol | |
ID | 4910150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1355698 |
End bp | 1356126 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640125202 |
Product | hypothetical protein |
Protein accession | YP_001056338 |
Protein GI | 126460060 |
COG category | [S] Function unknown |
COG ID | [COG2427] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG TAGTCACAAT ACCCAAGGCC GACTACGAGA GACTTCTGCA GGAGGTGCAG GCCCTGCGCA GGGAGGTGGA GGAGTTGAGC TCCCTCCTCC TCCCAGTAAA GATCGTGCTG GAGAAGTTGC CCCACCTAAT GGCGGACATA CAGGTGTTCA AAGTGGCGGC GCCGCTCATC TCCATGTTGT CCATAATGGA CTCGGCTGAC TTGAACGCCT TGGGCGCCGC CATGCAGGGA GGCGTGGTCT GCGCCAGCAA GGCGTTGAGA CAGGTGGCCG AGGACGGGGC GCCGCGTGTG GGGCTCTTCG GCCTCCTCTC CGCCATGCGT GACCCAGAGG TGCAGAAGGC CATGGGCCTC ATGGTGACTC TGCTAAAGGC CATGGGCAGT TGCATGGAGG AGAACCTAAA ACAGGTAAGC GAGAAGTAG
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Protein sequence | MSEVVTIPKA DYERLLQEVQ ALRREVEELS SLLLPVKIVL EKLPHLMADI QVFKVAAPLI SMLSIMDSAD LNALGAAMQG GVVCASKALR QVAEDGAPRV GLFGLLSAMR DPEVQKAMGL MVTLLKAMGS CMEENLKQVS EK
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