Gene Pcal_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1446 
Symbol 
ID4909735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1352072 
End bp1353316 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content58% 
IMG OID640125196 
Productsulfite reductase, dissimilatory-type alpha subunit 
Protein accessionYP_001056332 
Protein GI126460054 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID[TIGR02064] sulfite reductase, dissimilatory-type alpha subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATGT CAGCACCGCC CAACCTACCG CCGCCCGACC AGCTTCTACA GAGGGCCGAG 
GAGATATTGA AAGAGCTTGA GAAGGGGCCT TGGCCGAGCC ACGTGGCGGA GCTGAGGAAG
ACCCAGTACC CGCTCAGAGT CTACGGCGTG GGCCTCGCGG CTAGGAAGTC CCCCTGGGGC
CCCGGCGCCG TCAAGGTGGC CTATGTAAAC ACGGGGGTAT TATCCCGGTG GGCCAGAGAC
TGGGTTCCAG GCGGCGGCGT AGAGGTGCAC TTCAGAGTCT TCCACACCCC AGGCAAGTTC
TGGAAGACCG ACTTCATAAG AAAGATTACA AAGATCTCCA GAGAGCTGGG AGTGGGACTT
ATAGAGGTGG TGGGGCAGAC CGGCGCCTTT GTCCTCAACC TAACGCCCGA CAAGGCAGAG
GAGATGGTGG ACGCCCTTAG GTCCATAGGC ACAGACGTAG GCGGCAGCGG AGACGCCATA
AGAGCCCTCA ACGCCTGCGT CGGGCCCGCC CTATGCGAAT TCGCCCTCTT CGACACCTTG
AAGTGGTACG CGGAGTTTCA CAAAGACAAA CGCGTCAACG ACAACATAGC GACGCCCAAC
TACCCCTACA AGTTCAAGAT CAAAATATCT GGCTGTCCTC TGGACTGCGC CCGCGCCAAC
AGGGCAGACA TAGGCTTCAT TGGCGTGTGG GAGGGTGCTC CTGAGGTGGA TCAGGCTAAG
TTTAGGGAGC TTGTGGAGAG GGGGGTTGTG GACCCGGTGA AGCTTGCCGC TAACTGCCCC
AGCGGCGCCA TTAGGTGGGA CGCCGAGAAG AAAGAGCTCG TGATTGATGG GAGCAAGTGC
AAAAAGTCTA TGCACTGCAT CCGCACAGCC TTCCCAGCCA TAAAGCCAGG CAAGAATAGG
AAAGTCGCTG TAGTAATTGG GGGCGGAGTT AAGGGGAGGT ATGGGCCTAA GCTAGGCTGG
TTCATCGGCT ACCTAAGGCC GGACCAGGTG AAGGAGGCCA TAGACCTCAC CTTCAAGGTC
ATTGCCCCCT GGGAGGCCGA GGCTCAGCCC AAGTACAGGC TCGGCGACTA CATTTTGGTG
ACTGGGCTGG ACAAGTTCAT TGAGAAGGCT GGGATTAAGC TTGAGGGCAT GCCCGAGTCC
ATTGCCAAGA CGCCGGACGA CGTGCCCTAC GCAGTGTTGC CCAAGGAGGA GAGAGACATG
TACCTAAAGC TGGTGGAAGA GCTCAAGGGC AAGGTGGGGG TATGA
 
Protein sequence
MLMSAPPNLP PPDQLLQRAE EILKELEKGP WPSHVAELRK TQYPLRVYGV GLAARKSPWG 
PGAVKVAYVN TGVLSRWARD WVPGGGVEVH FRVFHTPGKF WKTDFIRKIT KISRELGVGL
IEVVGQTGAF VLNLTPDKAE EMVDALRSIG TDVGGSGDAI RALNACVGPA LCEFALFDTL
KWYAEFHKDK RVNDNIATPN YPYKFKIKIS GCPLDCARAN RADIGFIGVW EGAPEVDQAK
FRELVERGVV DPVKLAANCP SGAIRWDAEK KELVIDGSKC KKSMHCIRTA FPAIKPGKNR
KVAVVIGGGV KGRYGPKLGW FIGYLRPDQV KEAIDLTFKV IAPWEAEAQP KYRLGDYILV
TGLDKFIEKA GIKLEGMPES IAKTPDDVPY AVLPKEERDM YLKLVEELKG KVGV