| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1440 |
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| Symbol | |
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| ID | 4908340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1347673 |
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| End bp | 1348320 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640125190 |
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| Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
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| Protein accession | YP_001056326 |
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| Protein GI | 126460048 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.294168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTCTACA TAGTGGGCGT CGGGCCGGGG GACAAGGAGC TCTTGACGCT TAAGGCGGTC
AAAATTCTGC AGAGGGCAGA CGTGGTGGCC TACGGCGACT TGGTGCCAGA GGAGGTGGTG
GAGGAGTTCG CCCCCCAGGC CGAGAGGGTG AAGATTGGGC ATAGGCATAA GGACCACGAC
GAGGTCGTGG CTAGGTTGCT TGAGGTGGCC AGGGAGAAGA ACGTGGTGTT GTTGAAGAAC
GGCGACCCCA CGGTGTTTGG GAGGGCGCAT CAGATCTGCC GCATGGCCCG CGCCGCGGGC
GTGCCGTGCG AGATTGTCCC AGGCGTGTCC AGCTTCACCG CCGCCTCAGC CCTAGGCGGA
GTGGAGCTAA CCGACGGCGT CGCCCTCCGC CACGTGGCCC TCCTCTCCTA CCCCCACGTC
GACGAGGAGG TTCTCAAGAG CGTGAGAGCC GACGTGTACG TCATATTTAT GATGGGCGAC
AGACTCTCCC AAGTGGCCGA GCTTGTGAAA AAGGTGTGCG GCAAAGCCGT GGAGGTCTAC
GTGTGTAGCA GAATCTCCCT GGGAGGGACC TGCCTCCCAC TGGAGAAGGT GGAGAAGGTT
GAGAAGCCCC TCCTAGTTAT TGTGAGAAAG TGCTGGTCCC CGCCCTAG
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| Protein sequence | MLYIVGVGPG DKELLTLKAV KILQRADVVA YGDLVPEEVV EEFAPQAERV KIGHRHKDHD
EVVARLLEVA REKNVVLLKN GDPTVFGRAH QICRMARAAG VPCEIVPGVS SFTAASALGG
VELTDGVALR HVALLSYPHV DEEVLKSVRA DVYVIFMMGD RLSQVAELVK KVCGKAVEVY
VCSRISLGGT CLPLEKVEKV EKPLLVIVRK CWSPP
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