Gene Pcal_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1439 
Symbol 
ID4909350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1345917 
End bp1347395 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content57% 
IMG OID640125189 
Producthypothetical protein 
Protein accessionYP_001056325 
Protein GI126460047 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.174659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCATG AGGCGGCCCA ACATGGAGCC GCGGCGTTTA AGATGGGGGA TACCTCCAAC 
ATCAAGCCTT TTAAAGCCAA GGAGGACCAG GTCAAGGTTC TTCACTCCAG GGTGGGTCTT
GAGCTTCCTA AGGACCCCCT GGAGCACATA CGGCGGCGGC TGAGGGAGGA GGTTTCACGG
AACCGGAACG TGAAAATGGC CATGGAGGTG TGCGTCCACT GCGGCATATG CCTAGACAAC
TGCCCCACAT ATGTCCAGAC TAAGGACATC TTCAACTCCC CCGTGGGCAG GGCGGAGCTC
ATTAGGTCTG TAATTAAGGC CGAGTCCCTG AGCGGGAAGC TGTTCGGCAA AGCCGTGGGG
GCGGTGAAGC TCACGGAGGA GCAGTTGGAG AAGATATACA CGTACTACTA CCAGTGCCTG
GAGTGTAGAA AGTGCGCCTA CTCCTGCCCC TTCGGCATAG ATCAGGCGGA CATCACTAGG
CTTGTTAGAG AGGTCATGTA CGAGGCCGGC ATAATCTCGA AGTACATTGC CACAGTCATT
GACGCGGTGG AGCGCACGGG CACAAACTTG GGCATGAAGC CTATGGCGGT TATAAAGTCC
ATAACCTTTG CCGCGGGGGA GATCAAGGAG GAGAAGGGCG TCGAGGTGGA GTACTTCATA
TACCGCGACG ACCAGAACAA GCTGGTTAAG TACAAGGCGG ATCAGCCGGT CAAGGAGGTC
CAGCCCGGCG ACCCCGATTG GCCGGAGGCC TTGCTCATTC CGCCCTCGGC CGACTTCTTT
ACAAACATGG AGACTCTCAA GGGGTACATG CTCTTCCTCC ACCTAATGGG GATTAAGTAC
GCCTTTAGCA CAGAGATGGC GGAGCTGGCA AACTTCGGCC TATTTGCCTC AGAGCGCCAC
ATGAAGTTCA TAGGCCAGAA GGCCGTCAAC GCCGCGCTCA GGCTCAAGGT GAAGTACGTA
ATTGCGGGGG AGTGCGGCCA CGGGTGGCGC GCCTTTAAGA ACTACACTGG GCCAGAGCTG
GAGAAACACG GCATAAAGAC TATGCACGTC TTCCACCTAG TGGTAGACGC CATTAAAAAC
GGCAAACTGA AGCTGGACCC CTCCCGCAAC GGCGACGTCG TCTACACCTT CCAAGACTCC
TGCAACTACG CCCGCGGCGG CGACTTGACG GAGGAGCCAC GCTTCATAAT TCGGCACGTG
GTTAAGAACT ACGTGGAGAG CCCCAACAAC AGAGAGAAGA CGTGGTGCTG CGGCGGCGGA
GGGGGCCTGC TGACCGACGA GCTTCTGCCG CTGAGGATTC AATACGCCAA GAACTGGTAC
GAAGACGCCT TGAAGGTCAA CGCAAACCAC GTGGTCAGGG CCTGCGCCAT ATGCAAAGCC
CAGCTGAGCC ACACAATCCC CCACTTAAAC AAGGAGTACG GCAAAAACAT AACCTACTCC
GGGCTAATGG ACCTGGTATA CAAGGCCATA GTCGTTTAA
 
Protein sequence
MAHEAAQHGA AAFKMGDTSN IKPFKAKEDQ VKVLHSRVGL ELPKDPLEHI RRRLREEVSR 
NRNVKMAMEV CVHCGICLDN CPTYVQTKDI FNSPVGRAEL IRSVIKAESL SGKLFGKAVG
AVKLTEEQLE KIYTYYYQCL ECRKCAYSCP FGIDQADITR LVREVMYEAG IISKYIATVI
DAVERTGTNL GMKPMAVIKS ITFAAGEIKE EKGVEVEYFI YRDDQNKLVK YKADQPVKEV
QPGDPDWPEA LLIPPSADFF TNMETLKGYM LFLHLMGIKY AFSTEMAELA NFGLFASERH
MKFIGQKAVN AALRLKVKYV IAGECGHGWR AFKNYTGPEL EKHGIKTMHV FHLVVDAIKN
GKLKLDPSRN GDVVYTFQDS CNYARGGDLT EEPRFIIRHV VKNYVESPNN REKTWCCGGG
GGLLTDELLP LRIQYAKNWY EDALKVNANH VVRACAICKA QLSHTIPHLN KEYGKNITYS
GLMDLVYKAI VV