Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1437 |
Symbol | |
ID | 4909348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1344229 |
End bp | 1344666 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640125187 |
Product | hypothetical protein |
Protein accession | YP_001056323 |
Protein GI | 126460045 |
COG category | [S] Function unknown |
COG ID | [COG2427] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0867046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCG AGGAGAGGCT CTTAAAGGCG TTGGAGTCTC CTAAGACGCA GGAGGCTCTC GCAGAGATCG TCGAGCGGAT AGACGTCCTC CGCGACTTGG TGAGGACGCT GTGGGAGTTC AAGAGGAGCG GCGTGTTGGA CGACTTGCTC CAGTTGGCCA CTACGTTACG CTTTATAACC GAGGGCCTGC TCACGCCGGG CTTCATAGAG AAGGTCGCCA AGTTGCAGGA GGTGGCCCTA ACCGCCGCGG TCAACATGTC GCAAGATACT TCAAAGCTGG ACTGCTTAAC CACCGCCGTG GCCGTTGCGG AGGTGGAAAA GCCAATTGGC CTAATGGGCC TACTGGCGGC GCTTAGGGAC CCAGACGTGC AGAGAGGCTT GGGCTACCTC GTCTCTCTCT TAAAGCAGCT GGGCAAGTGC ATGGAGAAGA GGTATTAA
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Protein sequence | MSTEERLLKA LESPKTQEAL AEIVERIDVL RDLVRTLWEF KRSGVLDDLL QLATTLRFIT EGLLTPGFIE KVAKLQEVAL TAAVNMSQDT SKLDCLTTAV AVAEVEKPIG LMGLLAALRD PDVQRGLGYL VSLLKQLGKC MEKRY
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