Gene Pcal_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1437 
Symbol 
ID4909348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1344229 
End bp1344666 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID640125187 
Producthypothetical protein 
Protein accessionYP_001056323 
Protein GI126460045 
COG category[S] Function unknown 
COG ID[COG2427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0867046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCG AGGAGAGGCT CTTAAAGGCG TTGGAGTCTC CTAAGACGCA GGAGGCTCTC 
GCAGAGATCG TCGAGCGGAT AGACGTCCTC CGCGACTTGG TGAGGACGCT GTGGGAGTTC
AAGAGGAGCG GCGTGTTGGA CGACTTGCTC CAGTTGGCCA CTACGTTACG CTTTATAACC
GAGGGCCTGC TCACGCCGGG CTTCATAGAG AAGGTCGCCA AGTTGCAGGA GGTGGCCCTA
ACCGCCGCGG TCAACATGTC GCAAGATACT TCAAAGCTGG ACTGCTTAAC CACCGCCGTG
GCCGTTGCGG AGGTGGAAAA GCCAATTGGC CTAATGGGCC TACTGGCGGC GCTTAGGGAC
CCAGACGTGC AGAGAGGCTT GGGCTACCTC GTCTCTCTCT TAAAGCAGCT GGGCAAGTGC
ATGGAGAAGA GGTATTAA
 
Protein sequence
MSTEERLLKA LESPKTQEAL AEIVERIDVL RDLVRTLWEF KRSGVLDDLL QLATTLRFIT 
EGLLTPGFIE KVAKLQEVAL TAAVNMSQDT SKLDCLTTAV AVAEVEKPIG LMGLLAALRD
PDVQRGLGYL VSLLKQLGKC MEKRY