Gene Pcal_1428 details

Gene Information

• Locus tag: Pcal_1428
• ID: 4909288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1337195
• End bp: 1339078
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640125178
• Product: adenylylsulfate reductase subunit alpha
• Protein accession: YP_001056314
• Protein GI: 126460036
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR02061] adenosine phosphosulphate reductase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.102541
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGGCGC TCCACTTCCC CACGAAGGTC GTCGAGACTG ACATTTTGGT GGTAGGCGGC 
GGAATGGCGG GATGCGGCGC AGTTTTTGAG GCCAAGTACT GGTGCAGGAG CAAGTGCAAG 
GTGACCCTCG TGGAGAAGGC CAACACTGAG AAGAGCGGCG CAGTGGGGAT GGGCCTCAGC 
GCCACTAACC TAGGCGTCTT CAGCGAGGAC CCAGAGGACC CCAAGCCCGA GGAGTTCGTC 
CGCTACGTGC GCAACGACCT ACTCGGCGTG GTCAGAGAAG ACCTCGTGTA CGACATAGCG 
AGGCACATGA CCTCCACCAT AAAGCTCTTC GACATGTGGG GGCTGCCCAT CTGGCGCGAC 
CCCAAGACTG GGAAGTACCT CAGAACCGGC AGATGGCAGC ACCCAATCCA CGGGGAGTCC 
TACAAGGCGA TTATAGCCGA GCCCTGTAGA AAGTCCGCCG ACGAGGTCTA CGAGAGGGTC 
TTTGTCACAC ACCCGCTCCT AGATGAGCAG AGGCCCAACA GGATTGCGGG CGTGGTGGGC 
TTCCACGTGA GAGACGGCAC CTTCTACGTC TTTAAGGCCA AGGCGGTGAT CGTGGCCGCG 
GGCGGCACGT CGCTTTTGTA CAGGCCGCGT AGCGTCGGCG AGGGCCTGGG GAGGGCGTGG 
TACCCCACTT GGGCAAGCGG AAGCGCATAC GCCATACCTC TCCTGGCCGG GGCCGAGACT 
GTGAACTTTG AATTTAGGCT TGTGGTAGTG CGGTTCAAAG ACGCCTACGG CCCCGTGGGC 
TTCCCCTACC TCCTGCTCAA GATGCGCTCC ACTGACGTCA AGGGCAAGCA GTGGGAGCCT 
CTCCCAGACG AGGCAAAGGC GGAGTTGGCC AAGATCTTCT ACGACTACGC GTGGGCCAGG 
CCCACGCCGA CTCCCATAAG GACTTGGGTC ACTATTCAGA ACTTGAAGGA GGGCCGTGGG 
CCCGACATAA TGCAGACGCA AGAGAGGCTC CCAGACGAGG AGAGCCTCAA AGTTCTCTTT 
GAGGACTACT TAGACATGAC ACCCACCCAG GTGATATACT GGGCCAGCCA GAACATACAC 
CCGCAGAGGA CGCCCTCTGA GCTACTGCCC ACCGAGCCCT ACCAACAGGG TAGCCACGGC 
TCGTCGGCAG GCATGTGGGC CTCCGGGCCG CCGGACATTG CGCCGCCTGA GTACAAGTGG 
GGCCCCAACC GCATGTTGAC TGTGGAGGGC CTCTTCGGCG CCGGCGACAC CGTGGGGGCG 
TCTGGCCACA AGTTCTCCAG CGGCTCCTTC ACAGAGGGTA GAATCGCGGG CAAGTCTGCG 
GCTAGATACG TCTTGACCCA GGCCAAGGAC TACAAGCCGG TGGTGAGCAA CGACACCATT 
GAGAGATACA AGGAGATTGT GTACAGGCCG CTGGAGTGGT ACCACAAACT CAAGCCGTTG 
ACCACCACGC CGGAGATGCC GCCCAACTTG ACCAACTGGT TTGAGATACA CCCCAACTAC 
CTAAACTGGT ACCAGCTACT GACAAGGCTT CAGAAGATCA TGGACGAATA CGCGGCGGGC 
TGGGGTACCT TCTACACCAC CAATATGTAC ATGCTGGGCC GCGCCTGGGA GCTGTTGAAG 
ATGTTGGAGG AGGACTTCCG CTTCGCCGCC GCGGCCAGCC TCCACGAGCT CCTCCGCGTG 
TGGGAGGTCT ATCACCGCCT CATAGTGGGC CAGGCGGTGG TCTTCTCCAT GATGAACCGC 
AAGGAGAGCC GCGGCTACTA CTTCAACGCC GATTACCCCT ACATCGACGA GGACAACTGG 
CACGTATTCA CACACGTCAG ACGCGACCCC AAGACCGGCC AGTGGAGCTT CAGAACCTCC 
CCAGTAATAC ACATAATCGA CTAA 

 

Protein sequence

MSALHFPTKV VETDILVVGG GMAGCGAVFE AKYWCRSKCK VTLVEKANTE KSGAVGMGLS 
ATNLGVFSED PEDPKPEEFV RYVRNDLLGV VREDLVYDIA RHMTSTIKLF DMWGLPIWRD 
PKTGKYLRTG RWQHPIHGES YKAIIAEPCR KSADEVYERV FVTHPLLDEQ RPNRIAGVVG 
FHVRDGTFYV FKAKAVIVAA GGTSLLYRPR SVGEGLGRAW YPTWASGSAY AIPLLAGAET 
VNFEFRLVVV RFKDAYGPVG FPYLLLKMRS TDVKGKQWEP LPDEAKAELA KIFYDYAWAR 
PTPTPIRTWV TIQNLKEGRG PDIMQTQERL PDEESLKVLF EDYLDMTPTQ VIYWASQNIH 
PQRTPSELLP TEPYQQGSHG SSAGMWASGP PDIAPPEYKW GPNRMLTVEG LFGAGDTVGA 
SGHKFSSGSF TEGRIAGKSA ARYVLTQAKD YKPVVSNDTI ERYKEIVYRP LEWYHKLKPL 
TTTPEMPPNL TNWFEIHPNY LNWYQLLTRL QKIMDEYAAG WGTFYTTNMY MLGRAWELLK 
MLEEDFRFAA AASLHELLRV WEVYHRLIVG QAVVFSMMNR KESRGYYFNA DYPYIDEDNW 
HVFTHVRRDP KTGQWSFRTS PVIHIID