Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1412 |
Symbol | |
ID | 4909127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1324343 |
End bp | 1324657 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640125162 |
Product | transcriptional coactivator/pterin dehydratase |
Protein accession | YP_001056298 |
Protein GI | 126460020 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2154] Pterin-4a-carbinolamine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0351237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGTA AAAAGCCCAG CGACGCCTTG TCAGAGCTCG CGGGCAGGGG CGCAGTGGGC TGGGGCACGT CTGGGCAACC CCCCAGGCTC CACAAGCGCT TCTCTCTGGC GAGCTTCGCC GAGGCGGTGG AGTTCTTGGC AGAGGTGAGG AAGGTGGCCG ACGCGGCTAA CCACCACCCA GACGTATGCA TAGAGGGGTA CAACAAGGTG GACGTCTACC TCATAACCCA CGACGAGGGC TGTATCACAG AGAAAGACGT GGCCCTCGCC CTGGAGATCG AAAAAATATA CGCCAGGTTC GCCGCCCGGC GCTAG
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Protein sequence | MACKKPSDAL SELAGRGAVG WGTSGQPPRL HKRFSLASFA EAVEFLAEVR KVADAANHHP DVCIEGYNKV DVYLITHDEG CITEKDVALA LEIEKIYARF AARR
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