Gene Pcal_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1412 
Symbol 
ID4909127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1324343 
End bp1324657 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content62% 
IMG OID640125162 
Producttranscriptional coactivator/pterin dehydratase 
Protein accessionYP_001056298 
Protein GI126460020 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2154] Pterin-4a-carbinolamine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0351237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGTA AAAAGCCCAG CGACGCCTTG TCAGAGCTCG CGGGCAGGGG CGCAGTGGGC 
TGGGGCACGT CTGGGCAACC CCCCAGGCTC CACAAGCGCT TCTCTCTGGC GAGCTTCGCC
GAGGCGGTGG AGTTCTTGGC AGAGGTGAGG AAGGTGGCCG ACGCGGCTAA CCACCACCCA
GACGTATGCA TAGAGGGGTA CAACAAGGTG GACGTCTACC TCATAACCCA CGACGAGGGC
TGTATCACAG AGAAAGACGT GGCCCTCGCC CTGGAGATCG AAAAAATATA CGCCAGGTTC
GCCGCCCGGC GCTAG
 
Protein sequence
MACKKPSDAL SELAGRGAVG WGTSGQPPRL HKRFSLASFA EAVEFLAEVR KVADAANHHP 
DVCIEGYNKV DVYLITHDEG CITEKDVALA LEIEKIYARF AARR