| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1405 |
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| Symbol | |
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| ID | 4909085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1318745 |
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| End bp | 1319815 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640125155 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) |
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| Protein accession | YP_001056291 |
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| Protein GI | 126460013 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0132655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAGG CTAGGGAGCC TGAGGTCTTC ACCGTCTTGA AGCCCGACGG AGACGTGGTG
GAGGAGAACT ACGGCGTGGG GTACAAGCCA TCGTGGGAGG AGCTCGTCTC TGCGTACAAG
TACATGGTGC TGGGGAGGGC CTTGGACAAA TACGCCCTGC TATACCACAG GATGGGAAAG
GTGAAGTCCA CCTACGCCCC TCACGAGGGG CACGAGGCGG CTGACGTGGG CACGGCCATG
GCCCTCCGCC CCGAGGACTG GATTGCCCCC TACTATAGGA ACTTGACCCT ACTCCTGGTG
AGGGGAGTTC CGCTGGAGGT TCTCTGGGCC AAGTTCATGG CAAAGCTGGG CGACCCGGAC
AAGGGCAGGA ATCTGTCGGT GGAGTGGGGA GGGTTTAGAC AGTGGCGCCT GCTCTCCTTC
GGCGCGCCCA TCGGCCACCA CCTAATAGCG GCCGCGGGCT TCGCCTATGG GCTAAGGTAC
CGCGGGGGGA GAGAGGTGGT GGCCGCCTAC GTGGGAGACG GGGGGACCTC TACCAACGGC
TTCTACTCCT CGCTCATATT CAGCTCCGTC TTCTCTCTGC CCGTGGCCAT ATATATCTAC
AACAATGGAT ACGCCATATC TGTCCCATCG TCGCGTCAGT CCAAGACCAA GCGCCTGGCC
ACAAGGGCGG CGGGCTTCGG CGTGTTGGGC ATCGCCGCAG ATGGCATGGA CCTCTTGGCC
ACGCTGAAGG CGGCGAAGTT CGCCGTGGAG TACGCCAGGT CCAATGGCCC AGTCCTTGTG
GAGTTGGTCA CCTACAGATT TGGCCCGCAC ACCACGGCAG ACGATCCACA GACCAAGTAC
AGGGATAGGG CAGAGGTGGA GGAGGCCAAG TCGAGGGACC CCGTGGCTAG GCTGGAGAAG
TTCTTGCTCA GAAACGGACT GTTGAGCGAG GGCGAGGTGA AGTCCATTTG GCAGGAGGCC
GAGGAGAGGG TTAAGTCGGC GGCTAAGCAG GCCGAATCTC TGCCCGACGT CCCCCCTGAG
GAGCTGTACA CCGACATGTT CGAGGAGGAG GTGTGGATAA CCAGGGATTA G
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| Protein sequence | MVEAREPEVF TVLKPDGDVV EENYGVGYKP SWEELVSAYK YMVLGRALDK YALLYHRMGK
VKSTYAPHEG HEAADVGTAM ALRPEDWIAP YYRNLTLLLV RGVPLEVLWA KFMAKLGDPD
KGRNLSVEWG GFRQWRLLSF GAPIGHHLIA AAGFAYGLRY RGGREVVAAY VGDGGTSTNG
FYSSLIFSSV FSLPVAIYIY NNGYAISVPS SRQSKTKRLA TRAAGFGVLG IAADGMDLLA
TLKAAKFAVE YARSNGPVLV ELVTYRFGPH TTADDPQTKY RDRAEVEEAK SRDPVARLEK
FLLRNGLLSE GEVKSIWQEA EERVKSAAKQ AESLPDVPPE ELYTDMFEEE VWITRD
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