Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1403 |
Symbol | |
ID | 4909131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1316603 |
End bp | 1317778 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640125153 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_001056289 |
Protein GI | 126460011 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0133365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAGT TCAAGTTCCC CGACTTGGGC GAGGGGCTGG TGGAGGGGGA GGTGGTGAAG TGGCACAAGC GGGAGGGCGA CTTCGTCAAA GAGGGGGAGG ACCTCGTGGA CGTCATGACT GAGAAGGCCA CTGTGACTCT GCCCTCCCCC GCCACGGGGA GGATTGTGAA AATCTTGGCC AAGGAGGGGG GGGTGGTGAA GGTGGGCCAG GTCTTGTGCA TAATTGAGGA GGCGGCCCCC GGCGCCCCCG TTGAGGCTAA GGCCGAGGCG CGGCCAGAGG TTAGGGCTAT GCCCGCCGCG AGGCGGTTGG CCAAGGAGCT TGGGTTGGAC TTGTCCAAAG TGGTGGGAAC TGGGCCGGGC GGGGTTATCA CTGTGGAGGA CGTGAGGAGG GCCGCGGAGG CGGCGAAGCG GGAGGTCGGC GTTGCGGAGG CGAAGCCCGC TGCGCCTGCG CCGCCGGCTG AGGAGAGGCC TGCCCAGCCT CTGCGGGAGG AGAGGATCCC CGTGAGGGGT GTCAGGAGGG CCGTGGCCGA GAAGATGAAG AAGTCCAAGT CTCAGATACC CCACGCCTAC CACGTGGACG AGGTGGATGT GACAGAGTTG GTCAAGCTGA GGGAGAGGCT CAAGGCCTAC GCTGGGGATG TGAGGCTCAC CTACACGCCT TTCTTTGTGA AAGCCGCCGT GGCCGCCTTG AAGAAGTACC CCCTCCTCAA CGCGTCTTTC GACGAAGAGC GGGGCGAGAT AGTGGTGAAG AAGTACTTCA ACATAGGCGT CGCCGTGGAC ACAGAGAACG GGCTCGTCGT GGTTGTGATC AAAGACGCAG ACTCTAAGTC CATACTGGAG GTGGCAAGGG AGCTCCAGGA GAAGAGCGCG CGGGCCAGGG AGGGGAAGCT CTCCCTTGAC GACGTGAGGG ACTCCACCTT TACCATAACC AACATAGGCG CCATCGGCGG GCTCTGGGGC CTGGCAGTGG TGAACTACCC CGAGACCGCC ATATTGGCCA CGGGGAGAAT TGTGAAAAGG CCCAGGGTGT ACGAGGGGCA GGTGGTGCCC AGGGACGTGA TGTACGTGGC GGTGAGCTTC GACCACAGGG TGGTCGACGG GGGCTACGTG GCCAGGTTCA CCAACGCGTT TAAGGAGCTC CTCGAGTCCC CCGACCTCCT GGTGCTAAAC CTATGA
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Protein sequence | MIEFKFPDLG EGLVEGEVVK WHKREGDFVK EGEDLVDVMT EKATVTLPSP ATGRIVKILA KEGGVVKVGQ VLCIIEEAAP GAPVEAKAEA RPEVRAMPAA RRLAKELGLD LSKVVGTGPG GVITVEDVRR AAEAAKREVG VAEAKPAAPA PPAEERPAQP LREERIPVRG VRRAVAEKMK KSKSQIPHAY HVDEVDVTEL VKLRERLKAY AGDVRLTYTP FFVKAAVAAL KKYPLLNASF DEERGEIVVK KYFNIGVAVD TENGLVVVVI KDADSKSILE VARELQEKSA RAREGKLSLD DVRDSTFTIT NIGAIGGLWG LAVVNYPETA ILATGRIVKR PRVYEGQVVP RDVMYVAVSF DHRVVDGGYV ARFTNAFKEL LESPDLLVLN L
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