| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1402 |
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| Symbol | |
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| ID | 4909181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1315275 |
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| End bp | 1316606 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640125152 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001056288 |
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| Protein GI | 126460010 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0133365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGG TGGTCGTGGG AGGGGGCCCC GCGGGCTACG TCGCGGCGAT CAGGGCGGCC
CAGCTCGGCG CAGAGGTCAC GCTGGTGGAA GAGGCGCACC TGGGAGGCGA GTGCACAAAC
TGGGCCTGCA TACCGTCCAA GGCGCTTTTG CACATGGCCG ACGTCTTTTG GGAGGTCAAA
AACAGCCCCT GGGCGAGGGG CGGCGTGGAG TTCGACTGGA GGGAGGCCCA GAGGGCGAAG
GACGCCGTAG TGGCCAGGCT GAGGGGAGGC ATTGAGAAGC TCCTAGCGGC AAACGGCGTA
GAGGTAGTGG CGGGCAAGGC GGAGCCCGGC GACGGGAGGG CGGTTAGGGT GGGGGAGAGG
GAGGTGAGGT TTGACTCGCT GGTGCTGGCC ACCGGCAGCC TCCCGGCGCC TCTCCCCGGC
GCCCCCTTCG GGAGGAGGGT CCTGGACACA CGCCGCGCTC TAGCCCTCGA GGAGTTGCCC
AAGTCGCTCT TCATAGTGGG CGGCGGGGCC GCCGGCGTGG AGTTGGCCGT CTTATTCGCC
AAGCTAGGCG CAGAGGTGCA CTTGGCGGAG GCCATGGACA GGCTACTCCC TGCCATGGAC
AAGGACCTGG GGGCATACTT GGAGAGCCGC TTGAGGAAGC TGGGGGTCAA AGTCTACACC
TCAGCCGCCG TGGAGAAGGT GGAGGAGGGG CCGCGCTCTG TCAAAGTGCA CTTGAGAGGC
GGCGCGGCTG AAGTGGAATA CGTGGTTGTC GCCGTGGGGA GGAGGCCGAA CCCAGGCCCC
TTCGCCAAGT GGGTGGGCGA CGTGGCCAAG GTGGACGAGA GGATGTGGAC GGGGGTGGGT
CAGATATACG CCGCAGGCGA CGTGGCAGGC CCGCCCTACT TTGCCCACAA GGCCTACGCC
CAGGGCAAGG TGGCCGCCGA AAACGCCGCG GGGCGCCGCT CCTTCTACGT CCAGCGCCAC
GTCCCCTCAG TGGTATTCAC AGACCCAGAG GTGGTGTCGG TGGGATACAC GGAGGAAGAG
GCGCGTCGGG CAGGCTACGA GGCCGCCTCT GTGAGAGTGC CCATGTCGGC CATTGGCAGG
GCCGTGGCCG GCGGGAGGCC CGAGGGGTTT GTAAAACTAG TCTTCGACAG GAAGAGAGGC
GTCGTGCTGG GCTTCCACGG GGTGGGGCCC GGCCTGTCTG AAATTGCGGC GGAGGCCGCT
CTTGCCGTGG AGTTCTCAGC CACTGTGGAG GACCTCGCCC TGGTGATACA CCCACACCCC
ACTGTCTCAG AGGCGTTGGC CGAGGCGGCG GAGCTGGCCC TGGGCAAGCC TACTCACGTG
CTTAAGCCGT GA
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| Protein sequence | MKVVVVGGGP AGYVAAIRAA QLGAEVTLVE EAHLGGECTN WACIPSKALL HMADVFWEVK
NSPWARGGVE FDWREAQRAK DAVVARLRGG IEKLLAANGV EVVAGKAEPG DGRAVRVGER
EVRFDSLVLA TGSLPAPLPG APFGRRVLDT RRALALEELP KSLFIVGGGA AGVELAVLFA
KLGAEVHLAE AMDRLLPAMD KDLGAYLESR LRKLGVKVYT SAAVEKVEEG PRSVKVHLRG
GAAEVEYVVV AVGRRPNPGP FAKWVGDVAK VDERMWTGVG QIYAAGDVAG PPYFAHKAYA
QGKVAAENAA GRRSFYVQRH VPSVVFTDPE VVSVGYTEEE ARRAGYEAAS VRVPMSAIGR
AVAGGRPEGF VKLVFDRKRG VVLGFHGVGP GLSEIAAEAA LAVEFSATVE DLALVIHPHP
TVSEALAEAA ELALGKPTHV LKP
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