| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1401 |
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| Symbol | |
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| ID | 4909231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1314592 |
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| End bp | 1315278 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640125151 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_001056287 |
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| Protein GI | 126460009 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0111273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGGGGTC TCGACCTAGG CCTCCTAGAC TACGTCTCTG CGTGGCGCAT GATGAAAATT
CTCCACCGGG AGGTGGCGTC GGGGGGCGAC GACGCGTTTA TACTGGTGGA ACACCCCCAC
GTGATAACAG TGGGCAAGCA CGGCAGGACT AACAACGTGG TAAAGTGGGA GTTGTTCGTC
TACGTGGTGG AGAGGGGTGG AGACGCCACA TACCACGGCC CAGGCCAGCT GGTGGCCTAC
CCCGTGGTGA AGCTGAGGTG GCCCCTGTCG AGGTACCTCT GGATGCTGGA GGAGGCGGTG
ATAAGGTCGC TGAGGCCCCT GGGGGTAGAG GCGGGGAGAG TGGAGAAGCA CAGGGGGGTG
TGGGTGGGCG GAAAAAAGGT GGCGAGCATA GGCATCGCCG TGGAGGGCGG CGTCGCCTAC
CACGGGGTAG CGGTAAACGT CTCCACCGAC CTCTCCTACT TCTACCACAT AAACCCATGC
GGCCTCCACC CCTCCGCCAT CACCTCCCTC AACCAATTGG GCGTAGAGAT CTCCCTGGAG
GAGTACAAAG GCCTCTTCGT AGAGGCCTTC GAGGAAGTCT TCGAGGCCAA GGTTGTGTGG
GTAGACCCGG CGCCATACCT AGCGGCCGCC GCACAGCTCC GCGCATCGCC CACACTGCTC
TCGGCGCCAA TTGAAGCAAG CACTTAA
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| Protein sequence | MRGLDLGLLD YVSAWRMMKI LHREVASGGD DAFILVEHPH VITVGKHGRT NNVVKWELFV
YVVERGGDAT YHGPGQLVAY PVVKLRWPLS RYLWMLEEAV IRSLRPLGVE AGRVEKHRGV
WVGGKKVASI GIAVEGGVAY HGVAVNVSTD LSYFYHINPC GLHPSAITSL NQLGVEISLE
EYKGLFVEAF EEVFEAKVVW VDPAPYLAAA AQLRASPTLL SAPIEAST
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