| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1376 |
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| Symbol | |
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| ID | 4909298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1292235 |
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| End bp | 1292975 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640125127 |
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| Product | ABC transporter related |
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| Protein accession | YP_001056263 |
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| Protein GI | 126459985 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.585968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTCAAG TACCTGCTGT GCTCACGGTG AAGAACCTCT ACGTGTACAG AGGGGGCAAG
GCGGTTCTTG AGGACGTGAC TTTCGACGTG GGGAAGGAGT TTGTGCTCGT GGTGGGTCCC
AACGGCGCGG GGAAGACCAC CCTCTTCCTG GCAGTTTTAA ACCTGGTGAA GTACCGGGGC
GAGATCTGTG TAGAGGGGGT ATGCGGCCCA GAGAGGGTGA AGAGGGTTGG CTACGTCCCG
CAAGCGCTGG AGGTGGGGAG AGACGCAACT GTGTGGGAGT ACGTCTATCT GCCGGCCAAG
TTCCGCGGCA TTCCGCCCGA GGTTGCTAAG GCGGCTTTGG AGGAGGTGGG GATGGCGGAC
TTGGCGGATA GGCCGCTCTC CGCGCTGTCG GGGGGCCAGC GGCAGAGGGC CGCCATAGCA
AGGGCCCTCG CGGCGGGCGG GGACATCTTG CTCTTGGACG AGCCCTTGGC CAATGTGGAT
CCGCAGGGGA GGCTGGAGCT TCTCACACTG CTCAGAGAGC TGAAGAGGGG GAGGACGATT
CTAATGGCCT CTCACGAGCT CACACTCCCC TCAGACTTGG CGGACAAGGT CTTGTTGCTC
AACCGGAGAG TGGTGGCCTA CGGATCCCTT GACGAAGTTC TACAGGAGGA GGTCTTGTCC
AAAGTGTATA GCTACGTCCG CGTGGCGAAG GTTGGGGGGA GCTACGTGTG TGTCACAGAG
GACTATGCGC ATCCTCATTG A
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| Protein sequence | MVQVPAVLTV KNLYVYRGGK AVLEDVTFDV GKEFVLVVGP NGAGKTTLFL AVLNLVKYRG
EICVEGVCGP ERVKRVGYVP QALEVGRDAT VWEYVYLPAK FRGIPPEVAK AALEEVGMAD
LADRPLSALS GGQRQRAAIA RALAAGGDIL LLDEPLANVD PQGRLELLTL LRELKRGRTI
LMASHELTLP SDLADKVLLL NRRVVAYGSL DEVLQEEVLS KVYSYVRVAK VGGSYVCVTE
DYAHPH
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