Gene Pcal_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1374 
Symbol 
ID4908556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1290133 
End bp1291353 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID640125125 
Producthypothetical protein 
Protein accessionYP_001056261 
Protein GI126459983 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.643705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATGAGG TAAAATGGGG CATGAGGTAC TGGCTGTTGG CGCTGGTGGC GGCCGCGTTG 
GCCTGGGCCG GCATGCTCAC CGACCACTTC ACCTCGCCTC CCATAGAGGT GTGGGTGACT
AGGACAGACC AGTGGCTCTT CTGCACCGAC TACGGCGTCA CTGTGAATAT AAAGGCGCTG
GACCCCGTGA CTGTGAACAA GGTGGAGATA AAGGTCAAGT TCTTCGAGGA GGGCACCTAC
GTCCCCACGG TGACTTCGCG GTCTTACTCA GGCTTCTCTC TGGCCAAGGG CGAGTCTAAG
CAGATTGCCA CCACGTTCAA CTACTGCCCG CAACGGAGGG TAGACCCCCT GATACTCCTC
GAGATATACG TCTACATGCC CAACGCCACG TGGTCGTACC AGTACTACAT CGGCAGAGTG
CTCCCCACCA CCTACGAAGA CCTCGCGGCT AGGGCGGCCC AGCTGGATGC CAAGGTCAAG
GAGCTGGCCG CCCTGGTGGA CCAGCTCAAG GCCCAGATCG CGGACCTCCA GAGGCAGTTG
AAGCAGAGGG AGGCCCAGGT CGCAAACCTC ACCGCGCTTC TGGCCGCCGC GCGGGCTGAC
GCAAATCAGC TCTCCGCCGC GCTGGCCCAG GTGAGGGCCG AGCGCGACGC GCTTAGGGCC
CAGCTGGAGC AGACGCAGGC CCAGCTCAAC GCGGTGAGCC AGGCCAAGGC CGCCGTGGAG
GCCCAGCTGG CCGACGCCAA GAGGCAACTC GACGAGTTGA AGGCGGCCTA CGACAAGCTG
TCCGGCCAGT ACACAGACGC GCAGAGGCAG ATAGCGGACT TGCAGGCCCG ACTCGCCGAC
CTCCAGAAGA GGTACGAAGA GCTACAGGCC GAGGAGCGCC AGCTGAGAGA CAAGTACCTC
TCCCTAAGCG CGGACTACAA TAGGCTGAGC GGCCAATACT CCGAGCTCTC CAGGGCATAC
GAACAGGTGC AACAGGAGAA ACAGCTCCTC CAGAGCAGGT ACTCCGAGCT CAACACGGGC
TTCACATGGG CCATAAACTT GGCCACGGCC CTGGGCGTGG CGCTGTTGTT CGTCATAGCG
CTTGTGTTGA CTAGGAAGAG GCAGGCGGCG CCTCCCCCGC CGCCGACTCC GCAGACATCC
CCGCCCACCT CCGTCAAGGC GGCTGTAGTG TTGGAAAACG CCGCGGAGAG ACTCGTCAAG
TGGCCCGTCA CTCAAGAATA A
 
Protein sequence
MHEVKWGMRY WLLALVAAAL AWAGMLTDHF TSPPIEVWVT RTDQWLFCTD YGVTVNIKAL 
DPVTVNKVEI KVKFFEEGTY VPTVTSRSYS GFSLAKGESK QIATTFNYCP QRRVDPLILL
EIYVYMPNAT WSYQYYIGRV LPTTYEDLAA RAAQLDAKVK ELAALVDQLK AQIADLQRQL
KQREAQVANL TALLAAARAD ANQLSAALAQ VRAERDALRA QLEQTQAQLN AVSQAKAAVE
AQLADAKRQL DELKAAYDKL SGQYTDAQRQ IADLQARLAD LQKRYEELQA EERQLRDKYL
SLSADYNRLS GQYSELSRAY EQVQQEKQLL QSRYSELNTG FTWAINLATA LGVALLFVIA
LVLTRKRQAA PPPPPTPQTS PPTSVKAAVV LENAAERLVK WPVTQE