Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1366 |
Symbol | |
ID | 4909323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1281306 |
End bp | 1281656 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640125117 |
Product | PilT domain-containing protein |
Protein accession | YP_001056253 |
Protein GI | 126459975 |
COG category | [R] General function prediction only |
COG ID | [COG1848] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.435904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATATACG TTGACGTCAA CGCCATCTAC TACTTCCTAA CGGCGCATCC GCAGTACGGG CCACGGGCAA AGAGACTGTT TCAACAGTAC ATCGGCGAGT TGGCGACCTC CGCCCTAACC CCCTGGCTAA TGTTCGTACT CGCGAAAAAC CCAAAAGCCG CCGAAGCCGT CCTCCAGCTA GCCGACATAC TGCCCCTCAC CGCCGACATT TACACCTTAG CCCTCCAGCT CGAAAAGCCA CGCGACTTTG AAGACAGACT CCACTATGCC ACCATGAAGA AGCACGGGAT AAAGAAGATT ATCAGCAACG ACAAAGACTT CGACGGCCTA GACGTAGAAA GGATCTTCTA A
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Protein sequence | MIYVDVNAIY YFLTAHPQYG PRAKRLFQQY IGELATSALT PWLMFVLAKN PKAAEAVLQL ADILPLTADI YTLALQLEKP RDFEDRLHYA TMKKHGIKKI ISNDKDFDGL DVERIF
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