| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1363 |
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| Symbol | |
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| ID | 4910306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1278218 |
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| End bp | 1280473 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640125114 |
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| Product | putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB |
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| Protein accession | YP_001056250 |
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| Protein GI | 126459972 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase
[COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.475191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCAA GTGGGGGGAA CGTGAAGCTT GTTATTGTAT CTAACCGCCT CCCCGTGTCC
GTAGTGCAGA GAGATGGGGC GTATGAGATT AGGGAGGCCG TGGGGGGCTT GGCCACGGCG
GTGCGCTCTT TTCTCCGCGC AGTGGAGGGG GGTAAGGCGC TTGGCCTCTC GGAGGTGGTG
TGGGTGGGGT GGTCGGGGTT GAGGGCTGAG GCGGAGACGG AGGAGGTGCG GGGCAGGCTG
AGGGAGATGG GGCTTGTGAC TGTGCCGCTT GCGGGGGAGG AGGTGAACCT CTTCTACGAG
GGGTTTTGCA ACTCCACTCT CTGGCCCCTC TTCCACGGCC TTATCGTGTA TACCGTCTTT
GAGGGGAGGT TTTGGGACGC CTATGTTAGA GTCAACCAGA AGTTTGCAGA GGTCGTCCTG
CCCCTCGTGG AGCCTGGGGA CATAGTCTGG GTGCACGACT ACCACTTAAT GCTCCTGCCG
GCCATCATCC GCGACGCGGC CCCCGACGCG GCCGTCGGCT TCTTTCTCCA CATACCCTTC
CCGCCGGCGG AGGTCTTCCA GCTCATGCCA CCGCCGTGGA GGTCGGCAAT ACTCGACGGA
GTGCTGGGGG CAGACCTCGT GGGGTTCCAC GTCCACGAGT ACGTTAACAA CTTCTTGAGG
TCCGTGGCCA AGTTCCTGGG CTACAAGGCC GAGGCCGGCG CCGTATACGC CGGGAGGAGG
AAGGTGAAAG TGGGGGCCTT CCCCATAAGC ATAGACTTCG ACTTCTTCTA CAACTCCTCT
CTGCGCGAAG ACGTGGCGGC GATGATAAAG GAGTTTAGGC AGAGGCTAAG GGGGCTGAAG
ATAGTGTTTT CAATAGACAG GCTGGACTAC ACCAAGGGCA ATTTAAATAG GCTCAGGGCG
TGGGAGAGGT TTCTGAAGGA GAACCCCGAG TGGAGGGGCA AGGCCACTTT CATCATGGTG
GTTACGCCGT CTAGAACCGG CGTGCCGCAG TACGAGGCCA TGAAGAGGGA GATTGAGCGA
GAAGTGGGGA GGATAAACGG GGAACTCGGC GAAGTGGACT GGACCCCAGT GGTGTACATC
TACCGCTTTA TCCCCACCCC CACGCTACTC GCCTTGTACA ACGTGGCAGA CGTGGCGCTG
ATAACCCCCC TGAGAGATGG CATGAATCTA GTGGCCAAGG AATACGTGGC GTCGAGGAGG
AACTGCACAG GCGTCTTAAT ACTCAGCGAG ACGGCGGGGG CAGCCCACGA GTTGCTCCAA
GCGCTTATTG TAAACCCAAA CGACGAGGGC GGCGTAGCCG CCGCAATAAA GCGGGCGCTC
ACCATGAGCG AAGAGGAGCA GTGTAGGCGG ATAGAGGCGA TGCAGGAGCG CATTAGGCAA
CACGACGTGG TGAGATGGGC AGTCGACTTC ATCCACGCCC TGGCCGAGGC CCACCTAGAG
GCCCAAGAGG CCGCCCAGCC CGCCGCGGCG CCCGTGGACG GAAAAACCGC CGAGTCCATC
GCCGCCGCCT TCTCTGCGGC CGCCCGTCGC CTCCTACTGC TCGACTACGA CGGGACGCTG
GTGCCCCACT ACCCCTACGC CTATCAAGCA GTGCCCGACG CAGAGCTCCT AGCCCTCTTA
AGAGAGCTAG CGGCGCACCC CGAGACACAT GTGGCCGTGG TCAGCGGGAG GGGGAAGGAG
TTTCTAGAGG CTTGGCTGGG CAATCTGCCG ATATACATTG TGGCCGAGCA CGGCGCGTTT
ATAAGACACA GCGATGGGAA CTGGGTGCAG ATTTTCCCAT TTGACACAGA GTGGAAGGCC
GCCGTTAGAC GCGTCATGGA GGAGTTCGCA GAGCTGGCTC CGGGGTCCTA CGTGGAGGAG
AAGCAGTCCT CCATAGCGTG GCACTATAGA AATGTAGAGC CAGAGGTGGG GGAGGCCATT
GCGGCGAGGC TCATAGAAGC CCTCGGGGGA CTCCTCGCGG GGACAACCGC TGCAGTTTTA
AAGGGTAACA AGGTAGTGGA GGTAAGGCCG GCAGGCGTGA ACAAGGGGGC TGCGGCCAGG
CTGTTGGTGG AGAAGCTAAA CCCCGACTTT GTACTCGCGG CGGGCGACGA CGCCACAGAC
GAGGATATGT TCAAGGCGTT GCCCCCCACG GCGTACACCG TCAAAGTGGG GAGGGGCGAG
ACGGCGGCCA AGTACTACGT CCCTTCCTAC AAAAGGCTTA GGGAGCTCTT GACCCGCCTG
TCAAAATCTC TTCGGCCAAC TTCGCCACAG CCTTAG
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| Protein sequence | MRSSGGNVKL VIVSNRLPVS VVQRDGAYEI REAVGGLATA VRSFLRAVEG GKALGLSEVV
WVGWSGLRAE AETEEVRGRL REMGLVTVPL AGEEVNLFYE GFCNSTLWPL FHGLIVYTVF
EGRFWDAYVR VNQKFAEVVL PLVEPGDIVW VHDYHLMLLP AIIRDAAPDA AVGFFLHIPF
PPAEVFQLMP PPWRSAILDG VLGADLVGFH VHEYVNNFLR SVAKFLGYKA EAGAVYAGRR
KVKVGAFPIS IDFDFFYNSS LREDVAAMIK EFRQRLRGLK IVFSIDRLDY TKGNLNRLRA
WERFLKENPE WRGKATFIMV VTPSRTGVPQ YEAMKREIER EVGRINGELG EVDWTPVVYI
YRFIPTPTLL ALYNVADVAL ITPLRDGMNL VAKEYVASRR NCTGVLILSE TAGAAHELLQ
ALIVNPNDEG GVAAAIKRAL TMSEEEQCRR IEAMQERIRQ HDVVRWAVDF IHALAEAHLE
AQEAAQPAAA PVDGKTAESI AAAFSAAARR LLLLDYDGTL VPHYPYAYQA VPDAELLALL
RELAAHPETH VAVVSGRGKE FLEAWLGNLP IYIVAEHGAF IRHSDGNWVQ IFPFDTEWKA
AVRRVMEEFA ELAPGSYVEE KQSSIAWHYR NVEPEVGEAI AARLIEALGG LLAGTTAAVL
KGNKVVEVRP AGVNKGAAAR LLVEKLNPDF VLAAGDDATD EDMFKALPPT AYTVKVGRGE
TAAKYYVPSY KRLRELLTRL SKSLRPTSPQ P
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