| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1354 |
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| Symbol | |
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| ID | 4908276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1269793 |
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| End bp | 1270032 |
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| Gene Length | 240 bp |
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| Protein Length | 79 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125106 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_001056242 |
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| Protein GI | 126459964 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0871644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAGGAGT ACAGAGTGAG GGTGACTAAG AATTTTCACA TCGCAATCCC CGCGCCTATT
AGGGATAAGC TTGGCTTGCG GGCAGGGGAC AGCCTTATTG TGAGGCTTGA GGGAGACCGG
ATCATCGTTG AGAAGCCCAA GGGCGACGTC ACAGCGTTGA GGATTAGGCT CGGCCAGAGA
GTGGACTGGC GCCTCGTGGA AGAGGCCGTG GCAGAGGCCG CGGAGCGTAC TACCGATTAG
|
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| Protein sequence | MEEYRVRVTK NFHIAIPAPI RDKLGLRAGD SLIVRLEGDR IIVEKPKGDV TALRIRLGQR
VDWRLVEEAV AEAAERTTD
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